Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 AC069236.1-201ENST00000604339 616 ntBASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 AC073111.5-205ENST00000641717 521 ntBASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM53Q6P2H8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 TNRC18P3-201ENST00000441896 2691 ntBASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 AC006128.1-201ENST00000624704 1661 ntBASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 AC026185.1-201ENST00000445748 174 ntBASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 AC068338.2-201ENST00000563278 1430 ntBASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TMEM53Q6P2H8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TMEM53Q6P2H8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TMEM53Q6P2H8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 AC093503.3-201ENST00000624917 2352 ntBASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 AC005181.1-201ENST00000604782 1256 ntBASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms