Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL54Q6P161 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MRPL54Q6P161 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPL54Q6P161 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MRPL54Q6P161 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.87□□□□□ -0.03
MRPL54Q6P161 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 SMUG1P1-201ENST00000590640 811 ntBASIC14.87□□□□□ -0.03
MRPL54Q6P161 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPL54Q6P161 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
MRPL54Q6P161 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 AP000997.3-201ENST00000623333 2250 ntBASIC14.87□□□□□ -0.03
MRPL54Q6P161 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPL54Q6P161 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPL54Q6P161 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL54Q6P161 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MRPL54Q6P161 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 AC135050.7-201ENST00000624508 2218 ntBASIC14.86□□□□□ -0.03
MRPL54Q6P161 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.86□□□□□ -0.03
MRPL54Q6P161 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.86□□□□□ -0.03
MRPL54Q6P161 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.86□□□□□ -0.03
MRPL54Q6P161 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.86□□□□□ -0.03
MRPL54Q6P161 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.86□□□□□ -0.03
MRPL54Q6P161 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.86□□□□□ -0.03
MRPL54Q6P161 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.86□□□□□ -0.03
MRPL54Q6P161 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL54Q6P161 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.85□□□□□ -0.03
MRPL54Q6P161 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL54Q6P161 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL54Q6P161 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms