Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 RN7SL471P-201ENST00000580476 299 ntBASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 AL121906.2-201ENST00000621597 723 ntBASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 AL121829.2-201ENST00000620908 328 ntBASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 TCF3P1-201ENST00000423021 1937 ntBASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TTC39BQ5VTQ0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TTC39BQ5VTQ0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 GCSHP5-201ENST00000443090 522 ntBASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 AC098590.1-201ENST00000468126 897 ntBASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 AC233263.1-201ENST00000578059 224 ntBASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 MTDHP1-201ENST00000605323 784 ntBASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39BQ5VTQ0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 PRKY-204ENST00000533551 1019 ntBASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39BQ5VTQ0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms