Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRK2Q5S007 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 AP002383.4-201ENST00000442518 975 ntBASIC17.19■□□□□ 0.34
LRRK2Q5S007 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRK2Q5S007 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRK2Q5S007 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRK2Q5S007 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRK2Q5S007 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRK2Q5S007 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRK2Q5S007 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
LRRK2Q5S007 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRK2Q5S007 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRK2Q5S007 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRK2Q5S007 AC120114.3-201ENST00000611923 658 ntBASIC17.18■□□□□ 0.34
LRRK2Q5S007 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRK2Q5S007 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRRK2Q5S007 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LRRK2Q5S007 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRK2Q5S007 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LRRK2Q5S007 SPDYE15P-201ENST00000424157 909 ntBASIC17.18■□□□□ 0.34
LRRK2Q5S007 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.18■□□□□ 0.34
LRRK2Q5S007 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRK2Q5S007 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
LRRK2Q5S007 HLA-A-201ENST00000376802 1334 ntBASIC17.18■□□□□ 0.34
LRRK2Q5S007 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 ZNF444P1-201ENST00000559497 298 ntBASIC17.17■□□□□ 0.34
LRRK2Q5S007 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 C9orf163-202ENST00000624034 2573 ntBASIC17.17■□□□□ 0.34
LRRK2Q5S007 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 AL353719.1-201ENST00000566847 864 ntBASIC17.17■□□□□ 0.34
LRRK2Q5S007 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRK2Q5S007 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRK2Q5S007 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 HBZP1-201ENST00000354915 429 ntBASIC17.16■□□□□ 0.34
LRRK2Q5S007 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 CA15P1-201ENST00000481698 905 ntBASIC17.16■□□□□ 0.34
LRRK2Q5S007 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.16■□□□□ 0.34
LRRK2Q5S007 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRK2Q5S007 BX119927.1-201ENST00000636596 1552 ntBASIC17.16■□□□□ 0.34
LRRK2Q5S007 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRK2Q5S007 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms