Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 MIR4497-201ENST00000583208 89 ntBASIC17.38■□□□□ 0.37
FREM1Q5H8C1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 RPS2P55-201ENST00000397318 883 ntBASIC17.38■□□□□ 0.37
FREM1Q5H8C1 AC107956.1-201ENST00000494359 873 ntBASIC17.38■□□□□ 0.37
FREM1Q5H8C1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.37■□□□□ 0.37
FREM1Q5H8C1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 RPS2P4-201ENST00000476944 856 ntBASIC17.36■□□□□ 0.37
FREM1Q5H8C1 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FREM1Q5H8C1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 PRKY-204ENST00000533551 1019 ntBASIC17.35■□□□□ 0.37
FREM1Q5H8C1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.35■□□□□ 0.37
FREM1Q5H8C1 AL135905.2-201ENST00000584934 1404 ntBASIC17.35■□□□□ 0.37
FREM1Q5H8C1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 MIR718-201ENST00000390190 70 ntBASIC17.34■□□□□ 0.37
FREM1Q5H8C1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms