Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGO1Q5FBB7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGO1Q5FBB7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SGO1Q5FBB7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGO1Q5FBB7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.14■□□□□ 0.65
SGO1Q5FBB7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SGO1Q5FBB7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGO1Q5FBB7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGO1Q5FBB7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 CROCCP5-201ENST00000436658 830 ntBASIC19.13■□□□□ 0.65
SGO1Q5FBB7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.13■□□□□ 0.65
SGO1Q5FBB7 AC020763.4-201ENST00000623414 4170 ntBASIC19.13■□□□□ 0.65
SGO1Q5FBB7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 AC009237.14-201ENST00000609975 1594 ntBASIC19.12■□□□□ 0.65
SGO1Q5FBB7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGO1Q5FBB7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 TREX1-205ENST00000625293 1783 ntBASIC19.11■□□□□ 0.65
SGO1Q5FBB7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 RAP2CP1-201ENST00000605103 478 ntBASIC19.11■□□□□ 0.65
SGO1Q5FBB7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGO1Q5FBB7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 AC006970.2-201ENST00000450065 779 ntBASIC19.1■□□□□ 0.65
SGO1Q5FBB7 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.1■□□□□ 0.65
SGO1Q5FBB7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGO1Q5FBB7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms