Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP13A4Q4VNC1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A4Q4VNC1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 AC090192.1-201ENST00000517740 490 ntBASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 MIR4758-201ENST00000577688 71 ntBASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 AL109923.1-201ENST00000618799 583 ntBASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ATP13A4Q4VNC1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP13A4Q4VNC1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 Z82202.1-201ENST00000623446 1880 ntBASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 AC116351.2-201ENST00000606540 1585 ntBASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP13A4Q4VNC1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.52■□□□□ 0.87
ATP13A4Q4VNC1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP13A4Q4VNC1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.52■□□□□ 0.87
ATP13A4Q4VNC1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.52■□□□□ 0.87
ATP13A4Q4VNC1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP13A4Q4VNC1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 AL390719.1-204ENST00000412397 1219 ntBASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 AC097658.1-201ENST00000475555 843 ntBASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 AC083880.1-201ENST00000608266 535 ntBASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP13A4Q4VNC1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms