Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 TSPY17P-201ENST00000450329 467 ntBASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 AC008040.2-201ENST00000461049 708 ntBASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 HLA-G-202ENST00000376815 851 ntBASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RSPO4Q2I0M5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 GUSBP5-202ENST00000510805 1989 ntBASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 LINC01311-201ENST00000565162 1445 ntBASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 AP006587.1-201ENST00000534129 1502 ntBASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RSPO4Q2I0M5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RSPO4Q2I0M5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RSPO4Q2I0M5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 AC004951.3-201ENST00000418645 1148 ntBASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 AL023803.3-201ENST00000615559 522 ntBASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO4Q2I0M5 AL117328.2-201ENST00000624617 1940 ntBASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 AC080038.3-201ENST00000623346 1952 ntBASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO4Q2I0M5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms