Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EFNB3Q15768 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
EFNB3Q15768 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.83■□□□□ 0.28
EFNB3Q15768 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.83■□□□□ 0.28
EFNB3Q15768 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EFNB3Q15768 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.83■□□□□ 0.28
EFNB3Q15768 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
EFNB3Q15768 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.83■□□□□ 0.28
EFNB3Q15768 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.83■□□□□ 0.28
EFNB3Q15768 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFNB3Q15768 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.82■□□□□ 0.28
EFNB3Q15768 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.82■□□□□ 0.28
EFNB3Q15768 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EFNB3Q15768 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.82■□□□□ 0.28
EFNB3Q15768 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EFNB3Q15768 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
EFNB3Q15768 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.82■□□□□ 0.28
EFNB3Q15768 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.82■□□□□ 0.28
EFNB3Q15768 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.82■□□□□ 0.28
EFNB3Q15768 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.82■□□□□ 0.28
EFNB3Q15768 CD177P1-201ENST00000606252 935 ntBASIC16.82■□□□□ 0.28
EFNB3Q15768 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.82■□□□□ 0.28
EFNB3Q15768 AC073912.3-201ENST00000624414 853 ntBASIC16.82■□□□□ 0.28
EFNB3Q15768 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.82■□□□□ 0.28
EFNB3Q15768 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
EFNB3Q15768 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
EFNB3Q15768 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
EFNB3Q15768 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
EFNB3Q15768 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFNB3Q15768 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFNB3Q15768 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFNB3Q15768 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
EFNB3Q15768 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
EFNB3Q15768 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.81■□□□□ 0.28
EFNB3Q15768 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.81■□□□□ 0.28
EFNB3Q15768 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.81■□□□□ 0.28
EFNB3Q15768 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFNB3Q15768 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.81■□□□□ 0.28
EFNB3Q15768 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFNB3Q15768 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
EFNB3Q15768 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.81■□□□□ 0.28
EFNB3Q15768 NIFKP9-201ENST00000419265 221 ntBASIC16.81■□□□□ 0.28
EFNB3Q15768 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFNB3Q15768 KRT18P16-201ENST00000510337 1294 ntBASIC16.81■□□□□ 0.28
EFNB3Q15768 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.81■□□□□ 0.28
EFNB3Q15768 C1QL1P1-201ENST00000568105 661 ntBASIC16.81■□□□□ 0.28
EFNB3Q15768 AC026471.5-201ENST00000615068 467 ntBASIC16.81■□□□□ 0.28
EFNB3Q15768 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFNB3Q15768 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFNB3Q15768 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
EFNB3Q15768 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFNB3Q15768 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EFNB3Q15768 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFNB3Q15768 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EFNB3Q15768 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFNB3Q15768 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFNB3Q15768 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.8■□□□□ 0.28
EFNB3Q15768 KSR1P1-201ENST00000446298 240 ntBASIC16.8■□□□□ 0.28
EFNB3Q15768 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.8■□□□□ 0.28
EFNB3Q15768 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFNB3Q15768 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.8■□□□□ 0.28
EFNB3Q15768 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFNB3Q15768 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.8■□□□□ 0.28
EFNB3Q15768 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.8■□□□□ 0.28
EFNB3Q15768 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFNB3Q15768 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms