Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CDR2Q01850 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.02■□□□□ 0.95
CDR2Q01850 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDR2Q01850 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR2Q01850 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.01■□□□□ 0.95
CDR2Q01850 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR2Q01850 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR2Q01850 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 AC090192.1-201ENST00000517740 490 ntBASIC21.01■□□□□ 0.95
CDR2Q01850 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.01■□□□□ 0.95
CDR2Q01850 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.01■□□□□ 0.95
CDR2Q01850 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR2Q01850 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.01■□□□□ 0.95
CDR2Q01850 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CDR2Q01850 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CDR2Q01850 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.01■□□□□ 0.95
CDR2Q01850 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDR2Q01850 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR2Q01850 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDR2Q01850 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR2Q01850 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CDR2Q01850 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21■□□□□ 0.95
CDR2Q01850 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21■□□□□ 0.95
CDR2Q01850 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CDR2Q01850 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21■□□□□ 0.95
CDR2Q01850 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDR2Q01850 AC006557.6-201ENST00000623071 864 ntBASIC21■□□□□ 0.95
CDR2Q01850 HLA-B-256ENST00000639848 1089 ntBASIC21■□□□□ 0.95
CDR2Q01850 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDR2Q01850 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDR2Q01850 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDR2Q01850 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 AC104771.1-201ENST00000603335 964 ntBASIC20.99■□□□□ 0.95
CDR2Q01850 AC083880.1-201ENST00000608266 535 ntBASIC20.99■□□□□ 0.95
CDR2Q01850 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CDR2Q01850 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.99■□□□□ 0.95
CDR2Q01850 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.99■□□□□ 0.95
CDR2Q01850 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.99■□□□□ 0.95
CDR2Q01850 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
CDR2Q01850 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.99■□□□□ 0.95
CDR2Q01850 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR2Q01850 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.98■□□□□ 0.95
CDR2Q01850 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.98■□□□□ 0.95
CDR2Q01850 AC092368.3-202ENST00000574180 1591 ntBASIC20.98■□□□□ 0.95
CDR2Q01850 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 AC093484.2-201ENST00000580996 2166 ntBASIC20.98■□□□□ 0.95
CDR2Q01850 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.98■□□□□ 0.95
CDR2Q01850 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.98■□□□□ 0.95
CDR2Q01850 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.98■□□□□ 0.95
CDR2Q01850 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDR2Q01850 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.98■□□□□ 0.95
CDR2Q01850 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.98■□□□□ 0.95
CDR2Q01850 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.98■□□□□ 0.95
CDR2Q01850 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.98■□□□□ 0.95
CDR2Q01850 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR2Q01850 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CDR2Q01850 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.98■□□□□ 0.95
CDR2Q01850 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CDR2Q01850 TFP1-202ENST00000475455 1573 ntBASIC20.97■□□□□ 0.95
CDR2Q01850 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CDR2Q01850 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.97■□□□□ 0.95
CDR2Q01850 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms