Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CDK3Q00526 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.43■□□□□ 0.7
CDK3Q00526 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK3Q00526 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CDK3Q00526 AP002982.1-201ENST00000492365 877 ntBASIC19.43■□□□□ 0.7
CDK3Q00526 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.43■□□□□ 0.7
CDK3Q00526 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.43■□□□□ 0.7
CDK3Q00526 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK3Q00526 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.43■□□□□ 0.7
CDK3Q00526 AL353708.3-201ENST00000610272 989 ntBASIC19.43■□□□□ 0.7
CDK3Q00526 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.43■□□□□ 0.7
CDK3Q00526 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.43■□□□□ 0.7
CDK3Q00526 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.42■□□□□ 0.7
CDK3Q00526 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
CDK3Q00526 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK3Q00526 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK3Q00526 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.42■□□□□ 0.7
CDK3Q00526 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 TUBB8P6-201ENST00000436895 1288 ntBASIC19.42■□□□□ 0.7
CDK3Q00526 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.42■□□□□ 0.7
CDK3Q00526 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.42■□□□□ 0.7
CDK3Q00526 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK3Q00526 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDK3Q00526 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.42■□□□□ 0.7
CDK3Q00526 C1QL1P1-201ENST00000568105 661 ntBASIC19.42■□□□□ 0.7
CDK3Q00526 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK3Q00526 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK3Q00526 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK3Q00526 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDK3Q00526 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.41■□□□□ 0.7
CDK3Q00526 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK3Q00526 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK3Q00526 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 TMEM179-206ENST00000616017 1645 ntBASIC19.41■□□□□ 0.7
CDK3Q00526 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK3Q00526 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDK3Q00526 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK3Q00526 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.41■□□□□ 0.7
CDK3Q00526 AC073195.1-201ENST00000607241 877 ntBASIC19.41■□□□□ 0.7
CDK3Q00526 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDK3Q00526 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK3Q00526 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK3Q00526 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.41■□□□□ 0.7
CDK3Q00526 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.41■□□□□ 0.7
CDK3Q00526 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK3Q00526 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK3Q00526 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK3Q00526 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK3Q00526 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK3Q00526 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK3Q00526 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK3Q00526 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK3Q00526 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK3Q00526 NIFKP9-201ENST00000419265 221 ntBASIC19.4■□□□□ 0.7
CDK3Q00526 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK3Q00526 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK3Q00526 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK3Q00526 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK3Q00526 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.4■□□□□ 0.7
CDK3Q00526 MIR4785-201ENST00000585005 73 ntBASIC19.4■□□□□ 0.7
CDK3Q00526 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CDK3Q00526 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDK3Q00526 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK3Q00526 CD177P1-201ENST00000606252 935 ntBASIC19.4■□□□□ 0.7
CDK3Q00526 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK3Q00526 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDK3Q00526 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK3Q00526 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms