Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3AP84243 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3AP84243 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3AP84243 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3AP84243 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3AP84243 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
H3F3AP84243 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
H3F3AP84243 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
H3F3AP84243 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.64■□□□□ 0.42
H3F3AP84243 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.64■□□□□ 0.42
H3F3AP84243 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
H3F3AP84243 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.64■□□□□ 0.41
H3F3AP84243 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
H3F3AP84243 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.64■□□□□ 0.41
H3F3AP84243 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
H3F3AP84243 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.64■□□□□ 0.41
H3F3AP84243 AC006058.3-201ENST00000606217 1069 ntBASIC17.64■□□□□ 0.41
H3F3AP84243 PCDHAC2-203ENST00000615316 3011 ntBASIC17.64■□□□□ 0.41
H3F3AP84243 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.64■□□□□ 0.41
H3F3AP84243 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3AP84243 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.63■□□□□ 0.41
H3F3AP84243 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
H3F3AP84243 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3AP84243 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3AP84243 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.63■□□□□ 0.41
H3F3AP84243 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3AP84243 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 AC233263.1-201ENST00000578059 224 ntBASIC17.63■□□□□ 0.41
H3F3AP84243 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
H3F3AP84243 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3AP84243 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
H3F3AP84243 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
H3F3AP84243 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3AP84243 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
H3F3AP84243 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3AP84243 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3AP84243 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
H3F3AP84243 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.62■□□□□ 0.41
H3F3AP84243 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3AP84243 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3AP84243 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.62■□□□□ 0.41
H3F3AP84243 AC128676.1-201ENST00000454392 318 ntBASIC17.62■□□□□ 0.41
H3F3AP84243 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 FAM201B-201ENST00000458407 597 ntBASIC17.62■□□□□ 0.41
H3F3AP84243 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3AP84243 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.62■□□□□ 0.41
H3F3AP84243 ITM2C-210ENST00000620962 501 ntBASIC17.62■□□□□ 0.41
H3F3AP84243 AC073648.6-201ENST00000641589 218 ntBASIC17.62■□□□□ 0.41
H3F3AP84243 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.62■□□□□ 0.41
H3F3AP84243 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3AP84243 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.62■□□□□ 0.41
H3F3AP84243 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
H3F3AP84243 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.61■□□□□ 0.41
H3F3AP84243 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.61■□□□□ 0.41
H3F3AP84243 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.61■□□□□ 0.41
H3F3AP84243 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms