Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SEC61A1P61619 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SEC61A1P61619 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.19■□□□□ 0.34
SEC61A1P61619 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SEC61A1P61619 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.19■□□□□ 0.34
SEC61A1P61619 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.19■□□□□ 0.34
SEC61A1P61619 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.19■□□□□ 0.34
SEC61A1P61619 CDV3P1-201ENST00000471403 739 ntBASIC17.19■□□□□ 0.34
SEC61A1P61619 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.19■□□□□ 0.34
SEC61A1P61619 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.19■□□□□ 0.34
SEC61A1P61619 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.19■□□□□ 0.34
SEC61A1P61619 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SEC61A1P61619 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SEC61A1P61619 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SEC61A1P61619 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SEC61A1P61619 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61A1P61619 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SEC61A1P61619 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.18■□□□□ 0.34
SEC61A1P61619 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SEC61A1P61619 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SEC61A1P61619 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SEC61A1P61619 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 AL355472.2-201ENST00000422958 438 ntBASIC17.18■□□□□ 0.34
SEC61A1P61619 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.18■□□□□ 0.34
SEC61A1P61619 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.18■□□□□ 0.34
SEC61A1P61619 MIR4758-201ENST00000577688 71 ntBASIC17.18■□□□□ 0.34
SEC61A1P61619 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 FAM21FP-204ENST00000608637 956 ntBASIC17.18■□□□□ 0.34
SEC61A1P61619 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.18■□□□□ 0.34
SEC61A1P61619 AC133041.1-202ENST00000642053 222 ntBASIC17.18■□□□□ 0.34
SEC61A1P61619 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.18■□□□□ 0.34
SEC61A1P61619 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC61A1P61619 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SEC61A1P61619 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SEC61A1P61619 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.17■□□□□ 0.34
SEC61A1P61619 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SEC61A1P61619 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
SEC61A1P61619 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.17■□□□□ 0.34
SEC61A1P61619 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.17■□□□□ 0.34
SEC61A1P61619 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.17■□□□□ 0.34
SEC61A1P61619 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.17■□□□□ 0.34
SEC61A1P61619 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.17■□□□□ 0.34
SEC61A1P61619 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.17■□□□□ 0.34
SEC61A1P61619 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SEC61A1P61619 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
SEC61A1P61619 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.16■□□□□ 0.34
SEC61A1P61619 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SEC61A1P61619 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms