Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDX1P52945 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PDX1P52945 KRT8P9-201ENST00000558927 1449 ntBASIC19.17■□□□□ 0.66
PDX1P52945 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDX1P52945 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 AC079598.2-202ENST00000546624 1451 ntBASIC19.16■□□□□ 0.66
PDX1P52945 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDX1P52945 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.16■□□□□ 0.66
PDX1P52945 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.16■□□□□ 0.66
PDX1P52945 REXO1L10P-201ENST00000615707 1290 ntBASIC19.16■□□□□ 0.66
PDX1P52945 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.16■□□□□ 0.66
PDX1P52945 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
PDX1P52945 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDX1P52945 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.15■□□□□ 0.66
PDX1P52945 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDX1P52945 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.15■□□□□ 0.66
PDX1P52945 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.15■□□□□ 0.66
PDX1P52945 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDX1P52945 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.15■□□□□ 0.66
PDX1P52945 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.15■□□□□ 0.66
PDX1P52945 AC145285.6-201ENST00000604632 637 ntBASIC19.15■□□□□ 0.66
PDX1P52945 AL445228.2-201ENST00000605589 952 ntBASIC19.15■□□□□ 0.66
PDX1P52945 AP000525.1-201ENST00000608286 694 ntBASIC19.15■□□□□ 0.66
PDX1P52945 MIR6786-201ENST00000616843 113 ntBASIC19.15■□□□□ 0.66
PDX1P52945 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.15■□□□□ 0.66
PDX1P52945 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PDX1P52945 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PDX1P52945 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PDX1P52945 AC007225.1-201ENST00000566331 1836 ntBASIC19.15■□□□□ 0.66
PDX1P52945 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDX1P52945 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDX1P52945 LINC01521-201ENST00000504184 1943 ntBASIC19.15■□□□□ 0.66
PDX1P52945 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PDX1P52945 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDX1P52945 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDX1P52945 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.15■□□□□ 0.66
PDX1P52945 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDX1P52945 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.15■□□□□ 0.66
PDX1P52945 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDX1P52945 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PDX1P52945 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
PDX1P52945 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDX1P52945 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDX1P52945 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.14■□□□□ 0.66
PDX1P52945 AC092667.1-201ENST00000434301 2586 ntBASIC19.14■□□□□ 0.65
PDX1P52945 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PDX1P52945 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDX1P52945 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDX1P52945 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PDX1P52945 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.14■□□□□ 0.65
PDX1P52945 AC004264.1-201ENST00000608354 794 ntBASIC19.14■□□□□ 0.65
PDX1P52945 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDX1P52945 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.14■□□□□ 0.65
PDX1P52945 AC073314.1-201ENST00000568729 2216 ntBASIC19.14■□□□□ 0.65
PDX1P52945 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDX1P52945 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.14■□□□□ 0.65
PDX1P52945 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDX1P52945 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.13■□□□□ 0.65
PDX1P52945 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDX1P52945 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDX1P52945 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
PDX1P52945 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.13■□□□□ 0.65
PDX1P52945 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PDX1P52945 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.13■□□□□ 0.65
PDX1P52945 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 FP700111.2-201ENST00000619190 1892 ntBASIC19.13■□□□□ 0.65
PDX1P52945 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDX1P52945 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.13■□□□□ 0.65
PDX1P52945 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDX1P52945 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDX1P52945 AC073130.3-201ENST00000624389 2278 ntBASIC19.12■□□□□ 0.65
PDX1P52945 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.12■□□□□ 0.65
PDX1P52945 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.12■□□□□ 0.65
PDX1P52945 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDX1P52945 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.12■□□□□ 0.65
PDX1P52945 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDX1P52945 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.12■□□□□ 0.65
PDX1P52945 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.12■□□□□ 0.65
PDX1P52945 AP002982.1-201ENST00000492365 877 ntBASIC19.12■□□□□ 0.65
PDX1P52945 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.12■□□□□ 0.65
PDX1P52945 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms