Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KNTC1P50748 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.77■□□□□ 0.6
KNTC1P50748 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.77■□□□□ 0.6
KNTC1P50748 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.77■□□□□ 0.6
KNTC1P50748 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KNTC1P50748 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KNTC1P50748 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.77■□□□□ 0.6
KNTC1P50748 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KNTC1P50748 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.77■□□□□ 0.6
KNTC1P50748 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KNTC1P50748 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.77■□□□□ 0.59
KNTC1P50748 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KNTC1P50748 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KNTC1P50748 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
KNTC1P50748 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KNTC1P50748 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KNTC1P50748 COX11P1-201ENST00000489116 835 ntBASIC18.77■□□□□ 0.59
KNTC1P50748 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KNTC1P50748 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.77■□□□□ 0.59
KNTC1P50748 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.77■□□□□ 0.59
KNTC1P50748 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.77■□□□□ 0.59
KNTC1P50748 FBXW4P1-201ENST00000426721 2239 ntBASIC18.77■□□□□ 0.59
KNTC1P50748 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.77■□□□□ 0.59
KNTC1P50748 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
KNTC1P50748 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
KNTC1P50748 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.76■□□□□ 0.59
KNTC1P50748 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 AL450487.1-201ENST00000426799 995 ntBASIC18.76■□□□□ 0.59
KNTC1P50748 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KNTC1P50748 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.76■□□□□ 0.59
KNTC1P50748 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.76■□□□□ 0.59
KNTC1P50748 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.76■□□□□ 0.59
KNTC1P50748 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 AC010653.2-201ENST00000623505 997 ntBASIC18.76■□□□□ 0.59
KNTC1P50748 AC116562.4-202ENST00000641738 218 ntBASIC18.76■□□□□ 0.59
KNTC1P50748 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 TFP1-202ENST00000475455 1573 ntBASIC18.76■□□□□ 0.59
KNTC1P50748 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.76■□□□□ 0.59
KNTC1P50748 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KNTC1P50748 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 AL359075.1-203ENST00000462729 1002 ntBASIC18.76■□□□□ 0.59
KNTC1P50748 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
KNTC1P50748 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KNTC1P50748 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.76■□□□□ 0.59
KNTC1P50748 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KNTC1P50748 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.75■□□□□ 0.59
KNTC1P50748 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.75■□□□□ 0.59
KNTC1P50748 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KNTC1P50748 RCC2P6-201ENST00000526625 1557 ntBASIC18.75■□□□□ 0.59
KNTC1P50748 HLA-G-202ENST00000376815 851 ntBASIC18.75■□□□□ 0.59
KNTC1P50748 HLA-G-203ENST00000376818 1127 ntBASIC18.75■□□□□ 0.59
KNTC1P50748 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KNTC1P50748 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KNTC1P50748 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KNTC1P50748 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.75■□□□□ 0.59
KNTC1P50748 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
KNTC1P50748 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.75■□□□□ 0.59
KNTC1P50748 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KNTC1P50748 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KNTC1P50748 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KNTC1P50748 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KNTC1P50748 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.74■□□□□ 0.59
KNTC1P50748 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.74■□□□□ 0.59
KNTC1P50748 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.74■□□□□ 0.59
KNTC1P50748 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.74■□□□□ 0.59
KNTC1P50748 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 AC005332.1-201ENST00000577698 1310 ntBASIC18.74■□□□□ 0.59
KNTC1P50748 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KNTC1P50748 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.74■□□□□ 0.59
KNTC1P50748 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.74■□□□□ 0.59
KNTC1P50748 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KNTC1P50748 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms