Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRP9P49458 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SRP9P49458 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SRP9P49458 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRP9P49458 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRP9P49458 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SRP9P49458 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.44■□□□□ 0.38
SRP9P49458 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.44■□□□□ 0.38
SRP9P49458 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.44■□□□□ 0.38
SRP9P49458 AF201337.1-201ENST00000520239 748 ntBASIC17.44■□□□□ 0.38
SRP9P49458 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.44■□□□□ 0.38
SRP9P49458 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.44■□□□□ 0.38
SRP9P49458 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.44■□□□□ 0.38
SRP9P49458 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SRP9P49458 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SRP9P49458 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRP9P49458 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
SRP9P49458 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SRP9P49458 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.44■□□□□ 0.38
SRP9P49458 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.44■□□□□ 0.38
SRP9P49458 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SRP9P49458 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.43■□□□□ 0.38
SRP9P49458 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.43■□□□□ 0.38
SRP9P49458 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.43■□□□□ 0.38
SRP9P49458 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
SRP9P49458 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.43■□□□□ 0.38
SRP9P49458 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.43■□□□□ 0.38
SRP9P49458 PGM5P4-201ENST00000421970 445 ntBASIC17.43■□□□□ 0.38
SRP9P49458 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.43■□□□□ 0.38
SRP9P49458 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRP9P49458 AL121832.2-201ENST00000610979 668 ntBASIC17.43■□□□□ 0.38
SRP9P49458 AC100791.3-201ENST00000617619 330 ntBASIC17.43■□□□□ 0.38
SRP9P49458 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SRP9P49458 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SRP9P49458 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.43■□□□□ 0.38
SRP9P49458 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.43■□□□□ 0.38
SRP9P49458 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP9P49458 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.42■□□□□ 0.38
SRP9P49458 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.42■□□□□ 0.38
SRP9P49458 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRP9P49458 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.42■□□□□ 0.38
SRP9P49458 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRP9P49458 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
SRP9P49458 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.42■□□□□ 0.38
SRP9P49458 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.42■□□□□ 0.38
SRP9P49458 AL512625.2-201ENST00000417533 625 ntBASIC17.42■□□□□ 0.38
SRP9P49458 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.42■□□□□ 0.38
SRP9P49458 AC105036.2-201ENST00000569468 176 ntBASIC17.42■□□□□ 0.38
SRP9P49458 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.42■□□□□ 0.38
SRP9P49458 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.42■□□□□ 0.38
SRP9P49458 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.42■□□□□ 0.38
SRP9P49458 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.42■□□□□ 0.38
SRP9P49458 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP9P49458 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SRP9P49458 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SRP9P49458 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 AIRN-201ENST00000601203 4374 ntBASIC17.41■□□□□ 0.38
SRP9P49458 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms