Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.3■□□□□ 0.36
CX3CR1P49238 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CX3CR1P49238 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.3■□□□□ 0.36
CX3CR1P49238 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CX3CR1P49238 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.3■□□□□ 0.36
CX3CR1P49238 PHGDH-210ENST00000641115 1638 ntBASIC17.3■□□□□ 0.36
CX3CR1P49238 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.3■□□□□ 0.36
CX3CR1P49238 BX276092.2-201ENST00000417668 665 ntBASIC17.3■□□□□ 0.36
CX3CR1P49238 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.3■□□□□ 0.36
CX3CR1P49238 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CX3CR1P49238 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.3■□□□□ 0.36
CX3CR1P49238 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.3■□□□□ 0.36
CX3CR1P49238 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.3■□□□□ 0.36
CX3CR1P49238 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.3■□□□□ 0.36
CX3CR1P49238 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CX3CR1P49238 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CX3CR1P49238 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CX3CR1P49238 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CX3CR1P49238 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.29■□□□□ 0.36
CX3CR1P49238 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.29■□□□□ 0.36
CX3CR1P49238 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CX3CR1P49238 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.29■□□□□ 0.36
CX3CR1P49238 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.29■□□□□ 0.36
CX3CR1P49238 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CX3CR1P49238 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CX3CR1P49238 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.29■□□□□ 0.36
CX3CR1P49238 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.29■□□□□ 0.36
CX3CR1P49238 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CX3CR1P49238 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.29■□□□□ 0.36
CX3CR1P49238 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.29■□□□□ 0.36
CX3CR1P49238 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.29■□□□□ 0.36
CX3CR1P49238 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.29■□□□□ 0.36
CX3CR1P49238 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CX3CR1P49238 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.28■□□□□ 0.36
CX3CR1P49238 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 GPX1P1-201ENST00000388829 606 ntBASIC17.28■□□□□ 0.36
CX3CR1P49238 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CX3CR1P49238 RAP2CP1-201ENST00000605103 478 ntBASIC17.28■□□□□ 0.36
CX3CR1P49238 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.28■□□□□ 0.36
CX3CR1P49238 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.28■□□□□ 0.36
CX3CR1P49238 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.28■□□□□ 0.36
CX3CR1P49238 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CX3CR1P49238 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CX3CR1P49238 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CX3CR1P49238 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CX3CR1P49238 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.27■□□□□ 0.36
CX3CR1P49238 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CX3CR1P49238 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms