Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A12P48065 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A12P48065 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SLC6A12P48065 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A12P48065 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC6A12P48065 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SLC6A12P48065 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A12P48065 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A12P48065 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A12P48065 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A12P48065 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.04■□□□□ 0.64
SLC6A12P48065 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC6A12P48065 AC093484.2-201ENST00000580996 2166 ntBASIC19.04■□□□□ 0.64
SLC6A12P48065 AC008687.6-201ENST00000596318 630 ntBASIC19.04■□□□□ 0.64
SLC6A12P48065 AL121906.2-201ENST00000621597 723 ntBASIC19.04■□□□□ 0.64
SLC6A12P48065 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A12P48065 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A12P48065 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC6A12P48065 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC6A12P48065 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC6A12P48065 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC6A12P48065 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SLC6A12P48065 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC6A12P48065 UNC93B5-201ENST00000530315 699 ntBASIC19.03■□□□□ 0.64
SLC6A12P48065 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SLC6A12P48065 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC6A12P48065 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SLC6A12P48065 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC6A12P48065 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC6A12P48065 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC6A12P48065 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A12P48065 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A12P48065 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A12P48065 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC6A12P48065 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A12P48065 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A12P48065 AC007952.6-201ENST00000573168 2673 ntBASIC19.02■□□□□ 0.64
SLC6A12P48065 AC003957.1-201ENST00000625108 2673 ntBASIC19.02■□□□□ 0.64
SLC6A12P48065 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A12P48065 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A12P48065 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A12P48065 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC6A12P48065 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A12P48065 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A12P48065 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.02■□□□□ 0.64
SLC6A12P48065 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC6A12P48065 UNC93B4-201ENST00000505679 747 ntBASIC19.02■□□□□ 0.64
SLC6A12P48065 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A12P48065 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A12P48065 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A12P48065 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SLC6A12P48065 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A12P48065 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SLC6A12P48065 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A12P48065 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC6A12P48065 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLC6A12P48065 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms