Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
MTHFRP42898 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MTHFRP42898 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.66■□□□□ 0.9
MTHFRP42898 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MTHFRP42898 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.66■□□□□ 0.9
MTHFRP42898 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
MTHFRP42898 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MTHFRP42898 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 AC121338.2-201ENST00000622535 1744 ntBASIC20.65■□□□□ 0.9
MTHFRP42898 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MTHFRP42898 AC004980.1-204ENST00000429707 299 ntBASIC20.65■□□□□ 0.9
MTHFRP42898 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.65■□□□□ 0.9
MTHFRP42898 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.65■□□□□ 0.9
MTHFRP42898 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.65■□□□□ 0.9
MTHFRP42898 FAM87A-204ENST00000613235 858 ntBASIC20.65■□□□□ 0.9
MTHFRP42898 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.65■□□□□ 0.9
MTHFRP42898 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTHFRP42898 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MTHFRP42898 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.64■□□□□ 0.89
MTHFRP42898 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 AC026310.3-201ENST00000625186 2373 ntBASIC20.64■□□□□ 0.89
MTHFRP42898 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.64■□□□□ 0.89
MTHFRP42898 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.64■□□□□ 0.89
MTHFRP42898 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.64■□□□□ 0.89
MTHFRP42898 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 HMGA1P5-201ENST00000412453 271 ntBASIC20.64■□□□□ 0.89
MTHFRP42898 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.64■□□□□ 0.89
MTHFRP42898 AL358472.4-201ENST00000633140 710 ntBASIC20.64■□□□□ 0.89
MTHFRP42898 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.64■□□□□ 0.89
MTHFRP42898 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
MTHFRP42898 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTHFRP42898 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.63■□□□□ 0.89
MTHFRP42898 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTHFRP42898 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTHFRP42898 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.63■□□□□ 0.89
MTHFRP42898 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MTHFRP42898 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.63■□□□□ 0.89
MTHFRP42898 YBX1P10-201ENST00000444752 975 ntBASIC20.63■□□□□ 0.89
MTHFRP42898 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.63■□□□□ 0.89
MTHFRP42898 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.63■□□□□ 0.89
MTHFRP42898 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.63■□□□□ 0.89
MTHFRP42898 SLC25A1P4-201ENST00000567977 778 ntBASIC20.63■□□□□ 0.89
MTHFRP42898 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.63■□□□□ 0.89
MTHFRP42898 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.63■□□□□ 0.89
MTHFRP42898 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.63■□□□□ 0.89
MTHFRP42898 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTHFRP42898 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTHFRP42898 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
MTHFRP42898 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTHFRP42898 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.63■□□□□ 0.89
MTHFRP42898 AC244015.2-201ENST00000616358 1861 ntBASIC20.62■□□□□ 0.89
MTHFRP42898 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.62■□□□□ 0.89
MTHFRP42898 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.62■□□□□ 0.89
MTHFRP42898 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.62■□□□□ 0.89
MTHFRP42898 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MTHFRP42898 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MTHFRP42898 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MTHFRP42898 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.62■□□□□ 0.89
MTHFRP42898 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.61■□□□□ 0.89
MTHFRP42898 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTHFRP42898 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTHFRP42898 FAM8A6P-201ENST00000407496 1135 ntBASIC20.61■□□□□ 0.89
MTHFRP42898 AC117947.1-201ENST00000427448 529 ntBASIC20.61■□□□□ 0.89
MTHFRP42898 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.61■□□□□ 0.89
MTHFRP42898 TUBB8P6-201ENST00000436895 1288 ntBASIC20.61■□□□□ 0.89
MTHFRP42898 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MTHFRP42898 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.61■□□□□ 0.89
MTHFRP42898 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.61■□□□□ 0.89
MTHFRP42898 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.61■□□□□ 0.89
MTHFRP42898 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.61■□□□□ 0.89
MTHFRP42898 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTHFRP42898 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTHFRP42898 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTHFRP42898 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms