Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRIK1P39086 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRIK1P39086 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRIK1P39086 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRIK1P39086 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.8■□□□□ 0.92
GRIK1P39086 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
GRIK1P39086 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRIK1P39086 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GRIK1P39086 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRIK1P39086 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GRIK1P39086 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GRIK1P39086 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GRIK1P39086 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRIK1P39086 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
GRIK1P39086 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.79■□□□□ 0.92
GRIK1P39086 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.79■□□□□ 0.92
GRIK1P39086 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GRIK1P39086 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GRIK1P39086 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.79■□□□□ 0.92
GRIK1P39086 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.79■□□□□ 0.92
GRIK1P39086 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRIK1P39086 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.78■□□□□ 0.92
GRIK1P39086 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
GRIK1P39086 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
GRIK1P39086 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.78■□□□□ 0.92
GRIK1P39086 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.78■□□□□ 0.92
GRIK1P39086 YBX1P10-201ENST00000444752 975 ntBASIC20.78■□□□□ 0.92
GRIK1P39086 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.78■□□□□ 0.92
GRIK1P39086 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.78■□□□□ 0.92
GRIK1P39086 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 AP002982.1-201ENST00000492365 877 ntBASIC20.78■□□□□ 0.92
GRIK1P39086 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.78■□□□□ 0.92
GRIK1P39086 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.78■□□□□ 0.92
GRIK1P39086 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.78■□□□□ 0.92
GRIK1P39086 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
GRIK1P39086 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GRIK1P39086 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.78■□□□□ 0.92
GRIK1P39086 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.78■□□□□ 0.92
GRIK1P39086 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
GRIK1P39086 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.78■□□□□ 0.92
GRIK1P39086 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GRIK1P39086 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
GRIK1P39086 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
GRIK1P39086 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRIK1P39086 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.77■□□□□ 0.92
GRIK1P39086 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRIK1P39086 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GRIK1P39086 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GRIK1P39086 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
GRIK1P39086 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRIK1P39086 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GRIK1P39086 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.77■□□□□ 0.92
GRIK1P39086 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.77■□□□□ 0.92
GRIK1P39086 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.77■□□□□ 0.92
GRIK1P39086 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRIK1P39086 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GRIK1P39086 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.77■□□□□ 0.92
GRIK1P39086 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
GRIK1P39086 KRT17P2-201ENST00000300992 1314 ntBASIC20.77■□□□□ 0.91
GRIK1P39086 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GRIK1P39086 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GRIK1P39086 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GRIK1P39086 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
GRIK1P39086 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.76■□□□□ 0.91
GRIK1P39086 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.76■□□□□ 0.91
GRIK1P39086 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.76■□□□□ 0.91
GRIK1P39086 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.76■□□□□ 0.91
GRIK1P39086 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.76■□□□□ 0.91
GRIK1P39086 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.76■□□□□ 0.91
GRIK1P39086 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.76■□□□□ 0.91
GRIK1P39086 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
GRIK1P39086 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.76■□□□□ 0.91
GRIK1P39086 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.76■□□□□ 0.91
GRIK1P39086 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GRIK1P39086 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.76■□□□□ 0.91
GRIK1P39086 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
GRIK1P39086 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.76■□□□□ 0.91
GRIK1P39086 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GRIK1P39086 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.75■□□□□ 0.91
GRIK1P39086 AL691432.2-201ENST00000607222 2038 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms