Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.79■□□□□ 0.92
CTNNA1P35221 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.79■□□□□ 0.92
CTNNA1P35221 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.78■□□□□ 0.92
CTNNA1P35221 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 AL355472.2-201ENST00000422958 438 ntBASIC20.78■□□□□ 0.92
CTNNA1P35221 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.78■□□□□ 0.92
CTNNA1P35221 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNNA1P35221 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CTNNA1P35221 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNNA1P35221 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNNA1P35221 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNNA1P35221 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.77■□□□□ 0.92
CTNNA1P35221 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNNA1P35221 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTNNA1P35221 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTNNA1P35221 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNNA1P35221 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNNA1P35221 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTNNA1P35221 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.77■□□□□ 0.92
CTNNA1P35221 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.77■□□□□ 0.92
CTNNA1P35221 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNNA1P35221 AC231657.2-201ENST00000624556 255 ntBASIC20.77■□□□□ 0.92
CTNNA1P35221 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.77■□□□□ 0.92
CTNNA1P35221 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNNA1P35221 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.77■□□□□ 0.92
CTNNA1P35221 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.77■□□□□ 0.92
CTNNA1P35221 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CTNNA1P35221 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CTNNA1P35221 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTNNA1P35221 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CTNNA1P35221 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNNA1P35221 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CTNNA1P35221 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNNA1P35221 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNNA1P35221 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNNA1P35221 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNNA1P35221 HLA-G-202ENST00000376815 851 ntBASIC20.76■□□□□ 0.91
CTNNA1P35221 HLA-G-203ENST00000376818 1127 ntBASIC20.76■□□□□ 0.91
CTNNA1P35221 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNNA1P35221 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.76■□□□□ 0.91
CTNNA1P35221 BID-214ENST00000617586 542 ntTSL 5 BASIC20.76■□□□□ 0.91
CTNNA1P35221 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNNA1P35221 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.76■□□□□ 0.91
CTNNA1P35221 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTNNA1P35221 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CTNNA1P35221 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CTNNA1P35221 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CTNNA1P35221 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTNNA1P35221 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CTNNA1P35221 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNNA1P35221 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNNA1P35221 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.75■□□□□ 0.91
CTNNA1P35221 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.75■□□□□ 0.91
CTNNA1P35221 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.75■□□□□ 0.91
CTNNA1P35221 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.75■□□□□ 0.91
CTNNA1P35221 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 OR10C1-204ENST00000622521 1039 ntBASIC20.75■□□□□ 0.91
CTNNA1P35221 AC008694.1-202ENST00000636953 945 ntBASIC20.75■□□□□ 0.91
CTNNA1P35221 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 AC010980.2-201ENST00000587099 1412 ntBASIC20.75■□□□□ 0.91
CTNNA1P35221 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.75■□□□□ 0.91
CTNNA1P35221 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms