Protein–RNA interactions for Protein: P24864

CCNE1, G1/S-specific cyclin-E1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1P24864 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNE1P24864 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNE1P24864 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNE1P24864 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CCNE1P24864 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNE1P24864 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNE1P24864 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCNE1P24864 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.78■■□□□ 1.08
CCNE1P24864 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNE1P24864 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNE1P24864 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CCNE1P24864 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNE1P24864 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNE1P24864 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNE1P24864 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCNE1P24864 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNE1P24864 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CCNE1P24864 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.77■■□□□ 1.08
CCNE1P24864 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.77■■□□□ 1.08
CCNE1P24864 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNE1P24864 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNE1P24864 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNE1P24864 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCNE1P24864 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNE1P24864 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNE1P24864 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CCNE1P24864 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNE1P24864 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNE1P24864 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNE1P24864 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.07
CCNE1P24864 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CCNE1P24864 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCNE1P24864 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNE1P24864 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNE1P24864 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNE1P24864 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNE1P24864 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNE1P24864 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCNE1P24864 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNE1P24864 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCNE1P24864 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCNE1P24864 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNE1P24864 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNE1P24864 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCNE1P24864 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNE1P24864 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNE1P24864 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNE1P24864 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CCNE1P24864 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCNE1P24864 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNE1P24864 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNE1P24864 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNE1P24864 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCNE1P24864 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNE1P24864 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCNE1P24864 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNE1P24864 AC018553.1-201ENST00000616682 1458 ntBASIC21.75■■□□□ 1.07
CCNE1P24864 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNE1P24864 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNE1P24864 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNE1P24864 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNE1P24864 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNE1P24864 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.74■■□□□ 1.07
CCNE1P24864 AC116351.2-201ENST00000606540 1585 ntBASIC21.74■■□□□ 1.07
CCNE1P24864 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNE1P24864 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.74■■□□□ 1.07
CCNE1P24864 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNE1P24864 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNE1P24864 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNE1P24864 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCNE1P24864 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNE1P24864 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNE1P24864 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNE1P24864 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNE1P24864 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.74■■□□□ 1.07
CCNE1P24864 AC092118.2-201ENST00000613495 667 ntBASIC21.74■■□□□ 1.07
CCNE1P24864 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNE1P24864 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.74■■□□□ 1.07
CCNE1P24864 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CCNE1P24864 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNE1P24864 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNE1P24864 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNE1P24864 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CCNE1P24864 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNE1P24864 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNE1P24864 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNE1P24864 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.73■■□□□ 1.07
CCNE1P24864 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNE1P24864 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.73■■□□□ 1.07
CCNE1P24864 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCNE1P24864 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms