Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP24386 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHMP24386 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHMP24386 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.39■□□□□ 0.54
CHMP24386 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP24386 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP24386 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP24386 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP24386 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP24386 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 AC005332.7-201ENST00000614046 2005 ntBASIC18.39■□□□□ 0.53
CHMP24386 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP24386 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.39■□□□□ 0.53
CHMP24386 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP24386 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP24386 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHMP24386 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP24386 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CHMP24386 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP24386 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP24386 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP24386 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
CHMP24386 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP24386 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CHMP24386 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHMP24386 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP24386 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHMP24386 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP24386 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP24386 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMP24386 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP24386 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CHMP24386 KRT8P36-201ENST00000489121 1440 ntBASIC18.38■□□□□ 0.53
CHMP24386 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 BX119927.1-201ENST00000636596 1552 ntBASIC18.38■□□□□ 0.53
CHMP24386 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP24386 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP24386 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHMP24386 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP24386 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP24386 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP24386 ABHD17AP1-201ENST00000358206 933 ntBASIC18.37■□□□□ 0.53
CHMP24386 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP24386 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP24386 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP24386 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP24386 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP24386 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CHMP24386 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP24386 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP24386 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHMP24386 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP24386 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP24386 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms