Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MIR3652-201ENST00000579335 131 ntBASIC21.57■■□□□ 1.04
SYN1P17600 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SYN1P17600 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SYN1P17600 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYN1P17600 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.57■■□□□ 1.04
SYN1P17600 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYN1P17600 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYN1P17600 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYN1P17600 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYN1P17600 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.56■■□□□ 1.04
SYN1P17600 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.56■■□□□ 1.04
SYN1P17600 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.56■■□□□ 1.04
SYN1P17600 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.56■■□□□ 1.04
SYN1P17600 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.56■■□□□ 1.04
SYN1P17600 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.56■■□□□ 1.04
SYN1P17600 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.56■■□□□ 1.04
SYN1P17600 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.56■■□□□ 1.04
SYN1P17600 AL353719.1-201ENST00000566847 864 ntBASIC21.56■■□□□ 1.04
SYN1P17600 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
SYN1P17600 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.56■■□□□ 1.04
SYN1P17600 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.56■■□□□ 1.04
SYN1P17600 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.55■■□□□ 1.04
SYN1P17600 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SYN1P17600 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.55■■□□□ 1.04
SYN1P17600 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.55■■□□□ 1.04
SYN1P17600 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.55■■□□□ 1.04
SYN1P17600 YBX1P10-201ENST00000444752 975 ntBASIC21.55■■□□□ 1.04
SYN1P17600 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.55■■□□□ 1.04
SYN1P17600 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.55■■□□□ 1.04
SYN1P17600 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.55■■□□□ 1.04
SYN1P17600 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SYN1P17600 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.55■■□□□ 1.04
SYN1P17600 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYN1P17600 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.54■■□□□ 1.04
SYN1P17600 UNC93B7-201ENST00000509439 705 ntBASIC21.54■■□□□ 1.04
SYN1P17600 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.54■■□□□ 1.04
SYN1P17600 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.54■■□□□ 1.04
SYN1P17600 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SYN1P17600 NPAP1P7-201ENST00000613027 823 ntBASIC21.54■■□□□ 1.04
SYN1P17600 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.54■■□□□ 1.04
SYN1P17600 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYN1P17600 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.54■■□□□ 1.04
SYN1P17600 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYN1P17600 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYN1P17600 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYN1P17600 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SYN1P17600 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.53■■□□□ 1.04
SYN1P17600 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SYN1P17600 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SYN1P17600 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYN1P17600 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.53■■□□□ 1.04
SYN1P17600 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.53■■□□□ 1.04
SYN1P17600 CKBP1-201ENST00000565489 1086 ntBASIC21.53■■□□□ 1.04
SYN1P17600 AC111152.3-201ENST00000569699 673 ntBASIC21.53■■□□□ 1.04
SYN1P17600 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.53■■□□□ 1.04
SYN1P17600 HLA-A-209ENST00000638375 975 ntBASIC21.53■■□□□ 1.04
SYN1P17600 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYN1P17600 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYN1P17600 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
SYN1P17600 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.53■■□□□ 1.04
SYN1P17600 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYN1P17600 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYN1P17600 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.52■■□□□ 1.04
SYN1P17600 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.52■■□□□ 1.04
SYN1P17600 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.52■■□□□ 1.04
SYN1P17600 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYN1P17600 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
SYN1P17600 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.52■■□□□ 1.04
SYN1P17600 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYN1P17600 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYN1P17600 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYN1P17600 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.52■■□□□ 1.04
SYN1P17600 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.52■■□□□ 1.04
SYN1P17600 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.52■■□□□ 1.04
SYN1P17600 KRT17P6-201ENST00000453795 1220 ntBASIC21.52■■□□□ 1.04
SYN1P17600 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.52■■□□□ 1.04
SYN1P17600 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
SYN1P17600 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYN1P17600 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.52■■□□□ 1.03
SYN1P17600 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms