Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 AL023875.1-201ENST00000640777 796 ntBASIC18.74■□□□□ 0.59
ZNF888P0CJ79 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF888P0CJ79 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 PRORSD1P-201ENST00000295112 541 ntBASIC18.73■□□□□ 0.59
ZNF888P0CJ79 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 RN7SL471P-201ENST00000580476 299 ntBASIC18.73■□□□□ 0.59
ZNF888P0CJ79 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.73■□□□□ 0.59
ZNF888P0CJ79 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF888P0CJ79 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 AC239809.2-201ENST00000415381 517 ntBASIC18.72■□□□□ 0.59
ZNF888P0CJ79 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 C1QBPP2-201ENST00000528754 825 ntBASIC18.72■□□□□ 0.59
ZNF888P0CJ79 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 AP006587.1-201ENST00000534129 1502 ntBASIC18.72■□□□□ 0.59
ZNF888P0CJ79 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF888P0CJ79 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 AFG3L1P-217ENST00000557444 2447 ntBASIC18.71■□□□□ 0.59
ZNF888P0CJ79 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF888P0CJ79 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
ZNF888P0CJ79 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms