Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 AC092437.1-201ENST00000624794 1048 ntBASIC17.69■□□□□ 0.42
HLA-DPB1P04440 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 AC090340.1-201ENST00000620778 4980 ntBASIC17.69■□□□□ 0.42
HLA-DPB1P04440 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 MFSD11-216ENST00000590393 1141 ntBASIC17.68■□□□□ 0.42
HLA-DPB1P04440 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 AC010536.3-201ENST00000620306 533 ntBASIC17.68■□□□□ 0.42
HLA-DPB1P04440 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPB1P04440 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 AC004911.1-201ENST00000416316 871 ntBASIC17.67■□□□□ 0.42
HLA-DPB1P04440 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 BID-214ENST00000617586 542 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 NEFHP1-201ENST00000412845 2629 ntBASIC17.67■□□□□ 0.42
HLA-DPB1P04440 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DPB1P04440 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 TERF1P5-201ENST00000477545 1207 ntBASIC17.66■□□□□ 0.42
HLA-DPB1P04440 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DPB1P04440 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms