Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.43■□□□□ 0.54
PDGFAP04085 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.43■□□□□ 0.54
PDGFAP04085 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 AC011484.1-201ENST00000377652 1995 ntBASIC18.42■□□□□ 0.54
PDGFAP04085 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.42■□□□□ 0.54
PDGFAP04085 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.42■□□□□ 0.54
PDGFAP04085 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.42■□□□□ 0.54
PDGFAP04085 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.42■□□□□ 0.54
PDGFAP04085 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.42■□□□□ 0.54
PDGFAP04085 AC005229.4-201ENST00000610085 2198 ntBASIC18.42■□□□□ 0.54
PDGFAP04085 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PDGFAP04085 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFAP04085 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.42■□□□□ 0.54
PDGFAP04085 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFAP04085 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFAP04085 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFAP04085 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFAP04085 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.41■□□□□ 0.54
PDGFAP04085 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFAP04085 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.41■□□□□ 0.54
PDGFAP04085 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFAP04085 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFAP04085 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PDGFAP04085 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.41■□□□□ 0.54
PDGFAP04085 MIR1238-201ENST00000408483 83 ntBASIC18.41■□□□□ 0.54
PDGFAP04085 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.41■□□□□ 0.54
PDGFAP04085 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.41■□□□□ 0.54
PDGFAP04085 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.41■□□□□ 0.54
PDGFAP04085 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDGFAP04085 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFAP04085 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFAP04085 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFAP04085 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDGFAP04085 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PDGFAP04085 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PDGFAP04085 AL390955.1-201ENST00000428694 934 ntBASIC18.4■□□□□ 0.54
PDGFAP04085 KRT18P57-201ENST00000443599 1254 ntBASIC18.4■□□□□ 0.54
PDGFAP04085 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDGFAP04085 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.4■□□□□ 0.54
PDGFAP04085 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.4■□□□□ 0.54
PDGFAP04085 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.4■□□□□ 0.54
PDGFAP04085 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.4■□□□□ 0.54
PDGFAP04085 AL590326.2-201ENST00000625139 305 ntBASIC18.4■□□□□ 0.54
PDGFAP04085 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.4■□□□□ 0.54
PDGFAP04085 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFAP04085 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDGFAP04085 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.39■□□□□ 0.53
PDGFAP04085 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDGFAP04085 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFAP04085 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFAP04085 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFAP04085 AL121906.2-201ENST00000621597 723 ntBASIC18.39■□□□□ 0.53
PDGFAP04085 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PDGFAP04085 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.39■□□□□ 0.53
PDGFAP04085 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 KRT8P36-201ENST00000489121 1440 ntBASIC18.39■□□□□ 0.53
PDGFAP04085 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFAP04085 CYP2D8P-201ENST00000433633 1490 ntBASIC18.39■□□□□ 0.53
PDGFAP04085 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PDGFAP04085 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 AC027702.1-201ENST00000563810 1770 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms