Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.62■□□□□ 0.25
HLA-AP01891 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.62■□□□□ 0.25
HLA-AP01891 AC105233.4-201ENST00000642045 216 ntBASIC16.62■□□□□ 0.25
HLA-AP01891 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-AP01891 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
HLA-AP01891 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-AP01891 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-AP01891 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-AP01891 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-AP01891 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-AP01891 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-AP01891 POU5F1P4-201ENST00000413175 1085 ntBASIC16.61■□□□□ 0.25
HLA-AP01891 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-AP01891 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-AP01891 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-AP01891 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-AP01891 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-AP01891 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-AP01891 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-AP01891 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-AP01891 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-AP01891 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-AP01891 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-AP01891 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.6■□□□□ 0.25
HLA-AP01891 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-AP01891 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-AP01891 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-AP01891 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-AP01891 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-AP01891 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-AP01891 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 KRT8P36-201ENST00000489121 1440 ntBASIC16.6■□□□□ 0.25
HLA-AP01891 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-AP01891 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
HLA-AP01891 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-AP01891 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-AP01891 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-AP01891 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-AP01891 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-AP01891 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-AP01891 MIR572-201ENST00000384983 95 ntBASIC16.59■□□□□ 0.25
HLA-AP01891 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-AP01891 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-AP01891 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
HLA-AP01891 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HLA-AP01891 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-AP01891 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-AP01891 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-AP01891 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms