Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.67■□□□□ 0.42
UBL3O95164 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBL3O95164 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBL3O95164 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.67■□□□□ 0.42
UBL3O95164 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBL3O95164 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.66■□□□□ 0.42
UBL3O95164 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL3O95164 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL3O95164 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL3O95164 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UBL3O95164 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBL3O95164 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.66■□□□□ 0.42
UBL3O95164 AC069152.1-201ENST00000438030 544 ntBASIC17.66■□□□□ 0.42
UBL3O95164 AC097658.1-201ENST00000475555 843 ntBASIC17.66■□□□□ 0.42
UBL3O95164 AC091874.3-201ENST00000512672 1195 ntBASIC17.66■□□□□ 0.42
UBL3O95164 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UBL3O95164 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBL3O95164 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UBL3O95164 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL3O95164 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UBL3O95164 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.66■□□□□ 0.42
UBL3O95164 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL3O95164 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UBL3O95164 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.65■□□□□ 0.42
UBL3O95164 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBL3O95164 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.65■□□□□ 0.42
UBL3O95164 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
UBL3O95164 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.65■□□□□ 0.42
UBL3O95164 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.65■□□□□ 0.42
UBL3O95164 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.65■□□□□ 0.42
UBL3O95164 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.65■□□□□ 0.42
UBL3O95164 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.65■□□□□ 0.42
UBL3O95164 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.65■□□□□ 0.42
UBL3O95164 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
UBL3O95164 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.65■□□□□ 0.42
UBL3O95164 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.65■□□□□ 0.42
UBL3O95164 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL3O95164 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBL3O95164 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.64■□□□□ 0.42
UBL3O95164 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
UBL3O95164 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.64■□□□□ 0.41
UBL3O95164 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.64■□□□□ 0.41
UBL3O95164 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.64■□□□□ 0.41
UBL3O95164 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.64■□□□□ 0.41
UBL3O95164 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.64■□□□□ 0.41
UBL3O95164 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.64■□□□□ 0.41
UBL3O95164 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.64■□□□□ 0.41
UBL3O95164 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.64■□□□□ 0.41
UBL3O95164 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.64■□□□□ 0.41
UBL3O95164 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
UBL3O95164 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UBL3O95164 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL3O95164 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBL3O95164 AC005332.7-201ENST00000614046 2005 ntBASIC17.64■□□□□ 0.41
UBL3O95164 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.63■□□□□ 0.41
UBL3O95164 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
UBL3O95164 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.63■□□□□ 0.41
UBL3O95164 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.63■□□□□ 0.41
UBL3O95164 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL3O95164 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL3O95164 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UBL3O95164 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL3O95164 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL3O95164 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL3O95164 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.63■□□□□ 0.41
UBL3O95164 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBL3O95164 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.63■□□□□ 0.41
UBL3O95164 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL3O95164 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms