Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.37■□□□□ 0.37
ALX3O95076 AL162412.1-201ENST00000567129 965 ntBASIC17.37■□□□□ 0.37
ALX3O95076 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 AL137784.2-201ENST00000607332 1000 ntBASIC17.37■□□□□ 0.37
ALX3O95076 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.37■□□□□ 0.37
ALX3O95076 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ALX3O95076 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 TMEM179-206ENST00000616017 1645 ntBASIC17.36■□□□□ 0.37
ALX3O95076 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ALX3O95076 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.36■□□□□ 0.37
ALX3O95076 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.36■□□□□ 0.37
ALX3O95076 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ALX3O95076 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.36■□□□□ 0.37
ALX3O95076 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ALX3O95076 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.36■□□□□ 0.37
ALX3O95076 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.36■□□□□ 0.37
ALX3O95076 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.36■□□□□ 0.37
ALX3O95076 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.36■□□□□ 0.37
ALX3O95076 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.36■□□□□ 0.37
ALX3O95076 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
ALX3O95076 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ALX3O95076 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
ALX3O95076 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX3O95076 DPP3P2-201ENST00000416030 1696 ntBASIC17.36■□□□□ 0.37
ALX3O95076 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ALX3O95076 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.35■□□□□ 0.37
ALX3O95076 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.35■□□□□ 0.37
ALX3O95076 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 ID1-201ENST00000376105 1233 ntBASIC17.35■□□□□ 0.37
ALX3O95076 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.35■□□□□ 0.37
ALX3O95076 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ALX3O95076 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.35■□□□□ 0.37
ALX3O95076 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ALX3O95076 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.35■□□□□ 0.37
ALX3O95076 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ALX3O95076 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ALX3O95076 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ALX3O95076 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 BX119927.1-201ENST00000636596 1552 ntBASIC17.35■□□□□ 0.37
ALX3O95076 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ALX3O95076 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.35■□□□□ 0.37
ALX3O95076 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ALX3O95076 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX3O95076 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
ALX3O95076 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALX3O95076 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALX3O95076 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.34■□□□□ 0.37
ALX3O95076 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX3O95076 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ALX3O95076 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.34■□□□□ 0.37
ALX3O95076 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
ALX3O95076 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALX3O95076 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ALX3O95076 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX3O95076 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms