Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.64■□□□□ 0.25
PDCD6O75340 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6O75340 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6O75340 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6O75340 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6O75340 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6O75340 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6O75340 AC120498.9-201ENST00000339021 3867 ntBASIC16.64■□□□□ 0.25
PDCD6O75340 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.64■□□□□ 0.25
PDCD6O75340 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PDCD6O75340 AC010980.2-201ENST00000587099 1412 ntBASIC16.63■□□□□ 0.25
PDCD6O75340 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PDCD6O75340 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PDCD6O75340 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PDCD6O75340 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.63■□□□□ 0.25
PDCD6O75340 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PDCD6O75340 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.63■□□□□ 0.25
PDCD6O75340 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.63■□□□□ 0.25
PDCD6O75340 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.63■□□□□ 0.25
PDCD6O75340 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PDCD6O75340 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PDCD6O75340 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PDCD6O75340 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDCD6O75340 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.63■□□□□ 0.25
PDCD6O75340 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.62■□□□□ 0.25
PDCD6O75340 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDCD6O75340 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PDCD6O75340 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDCD6O75340 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.62■□□□□ 0.25
PDCD6O75340 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.62■□□□□ 0.25
PDCD6O75340 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PDCD6O75340 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PDCD6O75340 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDCD6O75340 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 AL032819.2-201ENST00000624543 2162 ntBASIC16.62■□□□□ 0.25
PDCD6O75340 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDCD6O75340 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.61■□□□□ 0.25
PDCD6O75340 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.61■□□□□ 0.25
PDCD6O75340 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PDCD6O75340 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDCD6O75340 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.61■□□□□ 0.25
PDCD6O75340 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.61■□□□□ 0.25
PDCD6O75340 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PDCD6O75340 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.61■□□□□ 0.25
PDCD6O75340 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.61■□□□□ 0.25
PDCD6O75340 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.61■□□□□ 0.25
PDCD6O75340 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.61■□□□□ 0.25
PDCD6O75340 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.61■□□□□ 0.25
PDCD6O75340 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.61■□□□□ 0.25
PDCD6O75340 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PDCD6O75340 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDCD6O75340 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PDCD6O75340 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDCD6O75340 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms