Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
OPHN1O60890 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPHN1O60890 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 KRT17P1-201ENST00000399211 1546 ntBASIC20.53■□□□□ 0.88
OPHN1O60890 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.53■□□□□ 0.88
OPHN1O60890 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.53■□□□□ 0.88
OPHN1O60890 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
OPHN1O60890 RPPH1-201ENST00000516869 333 ntBASIC20.53■□□□□ 0.88
OPHN1O60890 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.53■□□□□ 0.88
OPHN1O60890 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.53■□□□□ 0.88
OPHN1O60890 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.53■□□□□ 0.88
OPHN1O60890 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
OPHN1O60890 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.53■□□□□ 0.88
OPHN1O60890 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.53■□□□□ 0.88
OPHN1O60890 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.53■□□□□ 0.88
OPHN1O60890 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.53■□□□□ 0.88
OPHN1O60890 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPHN1O60890 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPHN1O60890 AFG3L1P-217ENST00000557444 2447 ntBASIC20.52■□□□□ 0.88
OPHN1O60890 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPHN1O60890 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPHN1O60890 KRT17P3-201ENST00000420566 1262 ntBASIC20.52■□□□□ 0.88
OPHN1O60890 AL355472.2-201ENST00000422958 438 ntBASIC20.52■□□□□ 0.88
OPHN1O60890 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.52■□□□□ 0.88
OPHN1O60890 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.52■□□□□ 0.88
OPHN1O60890 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
OPHN1O60890 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
OPHN1O60890 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
OPHN1O60890 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
OPHN1O60890 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPHN1O60890 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPHN1O60890 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPHN1O60890 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
OPHN1O60890 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.52■□□□□ 0.87
OPHN1O60890 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
OPHN1O60890 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
OPHN1O60890 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.51■□□□□ 0.87
OPHN1O60890 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
OPHN1O60890 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.51■□□□□ 0.87
OPHN1O60890 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.51■□□□□ 0.87
OPHN1O60890 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
OPHN1O60890 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.51■□□□□ 0.87
OPHN1O60890 PTBP1P-201ENST00000554374 1601 ntBASIC20.51■□□□□ 0.87
OPHN1O60890 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
OPHN1O60890 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
OPHN1O60890 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.51■□□□□ 0.87
OPHN1O60890 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OPHN1O60890 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
OPHN1O60890 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
OPHN1O60890 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
OPHN1O60890 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPHN1O60890 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
OPHN1O60890 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPHN1O60890 ECEL1P3-201ENST00000427961 737 ntBASIC20.5■□□□□ 0.87
OPHN1O60890 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.5■□□□□ 0.87
OPHN1O60890 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPHN1O60890 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPHN1O60890 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.5■□□□□ 0.87
OPHN1O60890 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.49■□□□□ 0.87
OPHN1O60890 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
OPHN1O60890 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
OPHN1O60890 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
OPHN1O60890 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
OPHN1O60890 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms