Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC24.96■■□□□ 1.59
CACNA1FO60840 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CACNA1FO60840 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.96■■□□□ 1.59
CACNA1FO60840 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.96■■□□□ 1.59
CACNA1FO60840 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
CACNA1FO60840 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
CACNA1FO60840 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CACNA1FO60840 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.95■■□□□ 1.59
CACNA1FO60840 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CACNA1FO60840 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.95■■□□□ 1.58
CACNA1FO60840 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CACNA1FO60840 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CACNA1FO60840 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
CACNA1FO60840 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CACNA1FO60840 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.95■■□□□ 1.58
CACNA1FO60840 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CACNA1FO60840 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CACNA1FO60840 AC116562.2-201ENST00000507042 360 ntBASIC24.94■■□□□ 1.58
CACNA1FO60840 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.94■■□□□ 1.58
CACNA1FO60840 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.94■■□□□ 1.58
CACNA1FO60840 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.94■■□□□ 1.58
CACNA1FO60840 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CACNA1FO60840 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.94■■□□□ 1.58
CACNA1FO60840 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.94■■□□□ 1.58
CACNA1FO60840 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CACNA1FO60840 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CACNA1FO60840 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CACNA1FO60840 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CACNA1FO60840 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CACNA1FO60840 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.93■■□□□ 1.58
CACNA1FO60840 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CACNA1FO60840 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.93■■□□□ 1.58
CACNA1FO60840 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.93■■□□□ 1.58
CACNA1FO60840 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.93■■□□□ 1.58
CACNA1FO60840 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC24.93■■□□□ 1.58
CACNA1FO60840 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
CACNA1FO60840 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CACNA1FO60840 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CACNA1FO60840 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.93■■□□□ 1.58
CACNA1FO60840 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.93■■□□□ 1.58
CACNA1FO60840 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CACNA1FO60840 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.93■■□□□ 1.58
CACNA1FO60840 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.93■■□□□ 1.58
CACNA1FO60840 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CACNA1FO60840 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.92■■□□□ 1.58
CACNA1FO60840 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CACNA1FO60840 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
CACNA1FO60840 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CACNA1FO60840 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CACNA1FO60840 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC24.92■■□□□ 1.58
CACNA1FO60840 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CACNA1FO60840 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CACNA1FO60840 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CACNA1FO60840 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CACNA1FO60840 HTR7P1-201ENST00000538670 1336 ntBASIC24.92■■□□□ 1.58
CACNA1FO60840 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CACNA1FO60840 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.91■■□□□ 1.58
CACNA1FO60840 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.91■■□□□ 1.58
CACNA1FO60840 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.91■■□□□ 1.58
CACNA1FO60840 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.91■■□□□ 1.58
CACNA1FO60840 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.91■■□□□ 1.58
CACNA1FO60840 REXO1L10P-201ENST00000615707 1290 ntBASIC24.91■■□□□ 1.58
CACNA1FO60840 REXO1L12P-201ENST00000622156 912 ntBASIC24.91■■□□□ 1.58
CACNA1FO60840 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.91■■□□□ 1.58
CACNA1FO60840 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.91■■□□□ 1.58
CACNA1FO60840 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CACNA1FO60840 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.91■■□□□ 1.58
CACNA1FO60840 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.91■■□□□ 1.58
CACNA1FO60840 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.91■■□□□ 1.58
CACNA1FO60840 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CACNA1FO60840 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.91■■□□□ 1.58
CACNA1FO60840 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.91■■□□□ 1.58
CACNA1FO60840 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.91■■□□□ 1.58
CACNA1FO60840 Z99916.2-201ENST00000604037 246 ntBASIC24.91■■□□□ 1.58
CACNA1FO60840 AL445675.2-201ENST00000620291 557 ntBASIC24.91■■□□□ 1.58
CACNA1FO60840 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CACNA1FO60840 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.9■■□□□ 1.58
CACNA1FO60840 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.9■■□□□ 1.58
CACNA1FO60840 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CACNA1FO60840 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CACNA1FO60840 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CACNA1FO60840 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms