Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH7O60245 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH7O60245 AL390719.1-204ENST00000412397 1219 ntBASIC18.83■□□□□ 0.6
PCDH7O60245 AC091874.3-201ENST00000512672 1195 ntBASIC18.83■□□□□ 0.6
PCDH7O60245 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
PCDH7O60245 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDH7O60245 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PCDH7O60245 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDH7O60245 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDH7O60245 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH7O60245 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
PCDH7O60245 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH7O60245 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH7O60245 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDH7O60245 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH7O60245 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH7O60245 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH7O60245 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDH7O60245 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH7O60245 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.82■□□□□ 0.6
PCDH7O60245 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH7O60245 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PCDH7O60245 AC005829.2-201ENST00000571422 1056 ntBASIC18.82■□□□□ 0.6
PCDH7O60245 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH7O60245 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH7O60245 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH7O60245 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH7O60245 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDH7O60245 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH7O60245 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH7O60245 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDH7O60245 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH7O60245 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH7O60245 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH7O60245 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH7O60245 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH7O60245 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH7O60245 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH7O60245 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH7O60245 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH7O60245 MIR4758-201ENST00000577688 71 ntBASIC18.81■□□□□ 0.6
PCDH7O60245 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.81■□□□□ 0.6
PCDH7O60245 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH7O60245 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH7O60245 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH7O60245 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH7O60245 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDH7O60245 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH7O60245 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PCDH7O60245 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH7O60245 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDH7O60245 AC018553.1-201ENST00000616682 1458 ntBASIC18.8■□□□□ 0.6
PCDH7O60245 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH7O60245 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH7O60245 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH7O60245 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.8■□□□□ 0.6
PCDH7O60245 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH7O60245 AC073210.2-201ENST00000430369 194 ntBASIC18.8■□□□□ 0.6
PCDH7O60245 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH7O60245 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH7O60245 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH7O60245 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH7O60245 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDH7O60245 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH7O60245 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH7O60245 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH7O60245 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH7O60245 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms