Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SSSCA1O60232 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.07■□□□□ 0.16
SSSCA1O60232 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSSCA1O60232 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSSCA1O60232 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.07■□□□□ 0.16
SSSCA1O60232 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SSSCA1O60232 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSSCA1O60232 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSSCA1O60232 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSSCA1O60232 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSSCA1O60232 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.07■□□□□ 0.16
SSSCA1O60232 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.07■□□□□ 0.16
SSSCA1O60232 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SSSCA1O60232 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.06■□□□□ 0.16
SSSCA1O60232 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 AL138781.2-201ENST00000617896 1843 ntBASIC16.06■□□□□ 0.16
SSSCA1O60232 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.06■□□□□ 0.16
SSSCA1O60232 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SSSCA1O60232 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.06■□□□□ 0.16
SSSCA1O60232 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.06■□□□□ 0.16
SSSCA1O60232 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.06■□□□□ 0.16
SSSCA1O60232 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SSSCA1O60232 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.06■□□□□ 0.16
SSSCA1O60232 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SSSCA1O60232 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSSCA1O60232 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.05■□□□□ 0.16
SSSCA1O60232 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.05■□□□□ 0.16
SSSCA1O60232 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SSSCA1O60232 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.05■□□□□ 0.16
SSSCA1O60232 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.05■□□□□ 0.16
SSSCA1O60232 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.05■□□□□ 0.16
SSSCA1O60232 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.05■□□□□ 0.16
SSSCA1O60232 SLC7A5P2-201ENST00000553010 536 ntBASIC16.05■□□□□ 0.16
SSSCA1O60232 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.05■□□□□ 0.16
SSSCA1O60232 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.05■□□□□ 0.16
SSSCA1O60232 AL355001.2-201ENST00000620617 1191 ntBASIC16.05■□□□□ 0.16
SSSCA1O60232 AL358852.1-201ENST00000623174 1268 ntBASIC16.05■□□□□ 0.16
SSSCA1O60232 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSSCA1O60232 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SSSCA1O60232 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SSSCA1O60232 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SSSCA1O60232 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.04■□□□□ 0.16
SSSCA1O60232 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 HTR7P1-202ENST00000624664 4411 ntBASIC16.04■□□□□ 0.16
SSSCA1O60232 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.04■□□□□ 0.16
SSSCA1O60232 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms