Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN4O14493 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN4O14493 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN4O14493 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN4O14493 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN4O14493 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.58■□□□□ 0.56
CLDN4O14493 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN4O14493 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN4O14493 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN4O14493 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 TFP1-202ENST00000475455 1573 ntBASIC18.58■□□□□ 0.56
CLDN4O14493 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN4O14493 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN4O14493 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CLDN4O14493 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN4O14493 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN4O14493 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN4O14493 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN4O14493 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 TCF3P1-201ENST00000423021 1937 ntBASIC18.57■□□□□ 0.56
CLDN4O14493 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN4O14493 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 AC239809.2-201ENST00000415381 517 ntBASIC18.57■□□□□ 0.56
CLDN4O14493 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN4O14493 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN4O14493 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CLDN4O14493 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN4O14493 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN4O14493 AC233263.1-201ENST00000578059 224 ntBASIC18.57■□□□□ 0.56
CLDN4O14493 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN4O14493 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 AP006587.1-201ENST00000534129 1502 ntBASIC18.57■□□□□ 0.56
CLDN4O14493 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CLDN4O14493 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN4O14493 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
CLDN4O14493 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLDN4O14493 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN4O14493 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN4O14493 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN4O14493 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 AC009237.14-201ENST00000609975 1594 ntBASIC18.56■□□□□ 0.56
CLDN4O14493 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CLDN4O14493 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN4O14493 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN4O14493 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CLDN4O14493 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLDN4O14493 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN4O14493 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN4O14493 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN4O14493 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN4O14493 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.56■□□□□ 0.56
CLDN4O14493 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN4O14493 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CLDN4O14493 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CLDN4O14493 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN4O14493 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN4O14493 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN4O14493 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLDN4O14493 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN4O14493 PRORSD1P-201ENST00000295112 541 ntBASIC18.55■□□□□ 0.56
CLDN4O14493 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CLDN4O14493 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN4O14493 C1QBPP2-201ENST00000528754 825 ntBASIC18.55■□□□□ 0.56
CLDN4O14493 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms