Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHL1O00533 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHL1O00533 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHL1O00533 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.45■■□□□ 1.66
CHL1O00533 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.44■■□□□ 1.66
CHL1O00533 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CHL1O00533 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
CHL1O00533 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 NIFKP9-201ENST00000419265 221 ntBASIC25.44■■□□□ 1.66
CHL1O00533 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.44■■□□□ 1.66
CHL1O00533 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CHL1O00533 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.44■■□□□ 1.66
CHL1O00533 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.44■■□□□ 1.66
CHL1O00533 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CHL1O00533 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHL1O00533 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CHL1O00533 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHL1O00533 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHL1O00533 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHL1O00533 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHL1O00533 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CHL1O00533 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.43■■□□□ 1.66
CHL1O00533 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.43■■□□□ 1.66
CHL1O00533 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.43■■□□□ 1.66
CHL1O00533 CD177P1-201ENST00000606252 935 ntBASIC25.43■■□□□ 1.66
CHL1O00533 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHL1O00533 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHL1O00533 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHL1O00533 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHL1O00533 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHL1O00533 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.42■■□□□ 1.66
CHL1O00533 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.42■■□□□ 1.66
CHL1O00533 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
CHL1O00533 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHL1O00533 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHL1O00533 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.42■■□□□ 1.66
CHL1O00533 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.42■■□□□ 1.66
CHL1O00533 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.42■■□□□ 1.66
CHL1O00533 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.42■■□□□ 1.66
CHL1O00533 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
CHL1O00533 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.42■■□□□ 1.66
CHL1O00533 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CHL1O00533 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25.42■■□□□ 1.66
CHL1O00533 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.41■■□□□ 1.66
CHL1O00533 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CHL1O00533 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHL1O00533 FAM197Y1-201ENST00000421178 764 ntBASIC25.41■■□□□ 1.66
CHL1O00533 AP002982.1-201ENST00000492365 877 ntBASIC25.41■■□□□ 1.66
CHL1O00533 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.41■■□□□ 1.66
CHL1O00533 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHL1O00533 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.41■■□□□ 1.66
CHL1O00533 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHL1O00533 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHL1O00533 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CHL1O00533 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHL1O00533 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC25.4■■□□□ 1.66
CHL1O00533 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
CHL1O00533 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CHL1O00533 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.4■■□□□ 1.66
CHL1O00533 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CHL1O00533 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHL1O00533 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHL1O00533 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.4■■□□□ 1.66
CHL1O00533 KSR1P1-201ENST00000446298 240 ntBASIC25.4■■□□□ 1.66
CHL1O00533 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.4■■□□□ 1.66
CHL1O00533 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.4■■□□□ 1.66
CHL1O00533 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHL1O00533 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.4■■□□□ 1.66
CHL1O00533 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.4■■□□□ 1.66
CHL1O00533 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
CHL1O00533 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.4■■□□□ 1.66
CHL1O00533 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHL1O00533 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHL1O00533 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.39■■□□□ 1.66
CHL1O00533 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHL1O00533 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHL1O00533 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
CHL1O00533 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.39■■□□□ 1.66
CHL1O00533 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHL1O00533 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.39■■□□□ 1.66
CHL1O00533 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CHL1O00533 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHL1O00533 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHL1O00533 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.39■■□□□ 1.66
CHL1O00533 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
CHL1O00533 TSPY15P-201ENST00000457163 923 ntBASIC25.39■■□□□ 1.66
CHL1O00533 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.39■■□□□ 1.66
CHL1O00533 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.39■■□□□ 1.66
CHL1O00533 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.39■■□□□ 1.66
CHL1O00533 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms