Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.03■□□□□ 0.96
O00370 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
O00370 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.02■□□□□ 0.96
O00370 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.02■□□□□ 0.96
O00370 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
O00370 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.02■□□□□ 0.96
O00370 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.02■□□□□ 0.96
O00370 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.02■□□□□ 0.96
O00370 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.02■□□□□ 0.96
O00370 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
O00370 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
O00370 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.01■□□□□ 0.95
O00370 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
O00370 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
O00370 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
O00370 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
O00370 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.01■□□□□ 0.95
O00370 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
O00370 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
O00370 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
O00370 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
O00370 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.01■□□□□ 0.95
O00370 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.01■□□□□ 0.95
O00370 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.01■□□□□ 0.95
O00370 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.01■□□□□ 0.95
O00370 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.01■□□□□ 0.95
O00370 AL158211.5-201ENST00000623583 2518 ntBASIC21.01■□□□□ 0.95
O00370 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
O00370 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
O00370 AC018553.1-201ENST00000616682 1458 ntBASIC21.01■□□□□ 0.95
O00370 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21■□□□□ 0.95
O00370 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21■□□□□ 0.95
O00370 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21■□□□□ 0.95
O00370 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21■□□□□ 0.95
O00370 POU5F1P3-201ENST00000428824 1078 ntBASIC21■□□□□ 0.95
O00370 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21■□□□□ 0.95
O00370 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21■□□□□ 0.95
O00370 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21■□□□□ 0.95
O00370 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
O00370 AC233263.1-201ENST00000578059 224 ntBASIC21■□□□□ 0.95
O00370 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
O00370 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21■□□□□ 0.95
O00370 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
O00370 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21■□□□□ 0.95
O00370 AC009237.14-201ENST00000609975 1594 ntBASIC21■□□□□ 0.95
O00370 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
O00370 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21■□□□□ 0.95
O00370 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
O00370 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21■□□□□ 0.95
O00370 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
O00370 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21■□□□□ 0.95
O00370 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
O00370 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
O00370 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.99■□□□□ 0.95
O00370 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.99■□□□□ 0.95
O00370 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
O00370 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.99■□□□□ 0.95
O00370 TSPY20P-201ENST00000450910 630 ntBASIC20.99■□□□□ 0.95
O00370 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.99■□□□□ 0.95
O00370 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
O00370 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
O00370 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
O00370 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.99■□□□□ 0.95
O00370 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.99■□□□□ 0.95
O00370 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
O00370 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 AP001271.2-201ENST00000624018 1556 ntBASIC20.98■□□□□ 0.95
O00370 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.98■□□□□ 0.95
O00370 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
O00370 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 TMEM179-206ENST00000616017 1645 ntBASIC20.98■□□□□ 0.95
O00370 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
O00370 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms