Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.28■□□□□ 0.84
DFFAO00273 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DFFAO00273 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DFFAO00273 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DFFAO00273 AP001271.2-201ENST00000624018 1556 ntBASIC20.28■□□□□ 0.84
DFFAO00273 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DFFAO00273 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.27■□□□□ 0.84
DFFAO00273 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DFFAO00273 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DFFAO00273 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.27■□□□□ 0.84
DFFAO00273 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.27■□□□□ 0.84
DFFAO00273 AC116351.2-201ENST00000606540 1585 ntBASIC20.27■□□□□ 0.84
DFFAO00273 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.27■□□□□ 0.84
DFFAO00273 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.27■□□□□ 0.84
DFFAO00273 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.27■□□□□ 0.84
DFFAO00273 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 POM121L13P-201ENST00000422362 380 ntBASIC20.27■□□□□ 0.84
DFFAO00273 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.27■□□□□ 0.84
DFFAO00273 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.27■□□□□ 0.84
DFFAO00273 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DFFAO00273 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.27■□□□□ 0.84
DFFAO00273 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.27■□□□□ 0.84
DFFAO00273 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
DFFAO00273 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DFFAO00273 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DFFAO00273 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.27■□□□□ 0.83
DFFAO00273 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.26■□□□□ 0.83
DFFAO00273 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.26■□□□□ 0.83
DFFAO00273 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
DFFAO00273 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.26■□□□□ 0.83
DFFAO00273 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.26■□□□□ 0.83
DFFAO00273 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.26■□□□□ 0.83
DFFAO00273 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
DFFAO00273 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.26■□□□□ 0.83
DFFAO00273 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.26■□□□□ 0.83
DFFAO00273 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.26■□□□□ 0.83
DFFAO00273 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.26■□□□□ 0.83
DFFAO00273 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.26■□□□□ 0.83
DFFAO00273 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.26■□□□□ 0.83
DFFAO00273 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DFFAO00273 AC009237.14-201ENST00000609975 1594 ntBASIC20.25■□□□□ 0.83
DFFAO00273 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DFFAO00273 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
DFFAO00273 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 AL121906.2-201ENST00000621597 723 ntBASIC20.25■□□□□ 0.83
DFFAO00273 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DFFAO00273 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
DFFAO00273 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.25■□□□□ 0.83
DFFAO00273 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
DFFAO00273 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DFFAO00273 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DFFAO00273 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
DFFAO00273 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.24■□□□□ 0.83
DFFAO00273 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.24■□□□□ 0.83
DFFAO00273 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DFFAO00273 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.24■□□□□ 0.83
DFFAO00273 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.24■□□□□ 0.83
DFFAO00273 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DFFAO00273 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.24■□□□□ 0.83
DFFAO00273 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
DFFAO00273 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.24■□□□□ 0.83
DFFAO00273 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DFFAO00273 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DFFAO00273 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.24■□□□□ 0.83
DFFAO00273 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DFFAO00273 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DFFAO00273 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
DFFAO00273 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DFFAO00273 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms