Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 TUBB8P6-201ENST00000436895 1288 ntBASIC16.38■□□□□ 0.21
RNF223E7ERA6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 AC063952.2-201ENST00000498792 1227 ntBASIC16.38■□□□□ 0.21
RNF223E7ERA6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 AC005786.4-201ENST00000623369 682 ntBASIC16.38■□□□□ 0.21
RNF223E7ERA6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.37■□□□□ 0.21
RNF223E7ERA6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 YBX1P10-201ENST00000444752 975 ntBASIC16.37■□□□□ 0.21
RNF223E7ERA6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF223E7ERA6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RNF223E7ERA6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 AC117947.1-201ENST00000427448 529 ntBASIC16.36■□□□□ 0.21
RNF223E7ERA6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 AC139887.4-201ENST00000607877 719 ntBASIC16.36■□□□□ 0.21
RNF223E7ERA6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 AIRN-201ENST00000601203 4374 ntBASIC16.36■□□□□ 0.21
RNF223E7ERA6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RNF223E7ERA6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF223E7ERA6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 AC116351.2-201ENST00000606540 1585 ntBASIC16.35■□□□□ 0.21
RNF223E7ERA6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 HMGA1P5-201ENST00000412453 271 ntBASIC16.35■□□□□ 0.21
RNF223E7ERA6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 KRT18P16-201ENST00000510337 1294 ntBASIC16.35■□□□□ 0.21
RNF223E7ERA6 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF223E7ERA6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF223E7ERA6 AC011298.2-201ENST00000617989 482 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms