Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 AC005082.1-201ENST00000413042 2259 ntBASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 KRT8P17-201ENST00000453110 1448 ntBASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 SLC7A5P1-201ENST00000568957 537 ntBASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 AL136967.2-201ENST00000623968 743 ntBASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 CROCCP3-202ENST00000420820 1947 ntBASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SMIM1B2RUZ4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SMIM1B2RUZ4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SMIM1B2RUZ4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SMIM1B2RUZ4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SMIM1B2RUZ4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM1B2RUZ4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 AC007613.1-201ENST00000572811 2597 ntBASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM1B2RUZ4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM1B2RUZ4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMIM1B2RUZ4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SMIM1B2RUZ4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM1B2RUZ4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SMIM1B2RUZ4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM1B2RUZ4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms