Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP27XA6NNY8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.27■■□□□ 1
USP27XA6NNY8 AP000997.3-201ENST00000623333 2250 ntBASIC21.27■■□□□ 1
USP27XA6NNY8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP27XA6NNY8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.27■■□□□ 1
USP27XA6NNY8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP27XA6NNY8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP27XA6NNY8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
USP27XA6NNY8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
USP27XA6NNY8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.27■■□□□ 1
USP27XA6NNY8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP27XA6NNY8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
USP27XA6NNY8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP27XA6NNY8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP27XA6NNY8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
USP27XA6NNY8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP27XA6NNY8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
USP27XA6NNY8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
USP27XA6NNY8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.27■□□□□ 0.99
USP27XA6NNY8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.27■□□□□ 0.99
USP27XA6NNY8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.26■□□□□ 0.99
USP27XA6NNY8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.26■□□□□ 0.99
USP27XA6NNY8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
USP27XA6NNY8 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.26■□□□□ 0.99
USP27XA6NNY8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.26■□□□□ 0.99
USP27XA6NNY8 AC027682.1-201ENST00000562846 899 ntBASIC21.26■□□□□ 0.99
USP27XA6NNY8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
USP27XA6NNY8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.26■□□□□ 0.99
USP27XA6NNY8 AC019069.1-201ENST00000610008 1333 ntBASIC21.26■□□□□ 0.99
USP27XA6NNY8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
USP27XA6NNY8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP27XA6NNY8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 RBM17P2-201ENST00000616397 1405 ntBASIC21.25■□□□□ 0.99
USP27XA6NNY8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.25■□□□□ 0.99
USP27XA6NNY8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP27XA6NNY8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP27XA6NNY8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.24■□□□□ 0.99
USP27XA6NNY8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 AC090164.3-201ENST00000610780 2143 ntBASIC21.24■□□□□ 0.99
USP27XA6NNY8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
USP27XA6NNY8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP27XA6NNY8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP27XA6NNY8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 AL356652.1-201ENST00000615962 565 ntBASIC21.23■□□□□ 0.99
USP27XA6NNY8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 AC068880.1-201ENST00000507289 2297 ntBASIC21.23■□□□□ 0.99
USP27XA6NNY8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms