Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 AL137784.2-201ENST00000607332 1000 ntBASIC15.76■□□□□ 0.11
CGB1A6NKQ9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CGB1A6NKQ9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 HLA-G-202ENST00000376815 851 ntBASIC15.75■□□□□ 0.11
CGB1A6NKQ9 HLA-G-203ENST00000376818 1127 ntBASIC15.75■□□□□ 0.11
CGB1A6NKQ9 GPX1P1-201ENST00000388829 606 ntBASIC15.75■□□□□ 0.11
CGB1A6NKQ9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 CROCCP5-201ENST00000436658 830 ntBASIC15.75■□□□□ 0.11
CGB1A6NKQ9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CGB1A6NKQ9 AC093484.2-201ENST00000580996 2166 ntBASIC15.75■□□□□ 0.11
CGB1A6NKQ9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 MKRN4P-201ENST00000444706 1521 ntBASIC15.74■□□□□ 0.11
CGB1A6NKQ9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 MIR663A-201ENST00000385250 93 ntBASIC15.74■□□□□ 0.11
CGB1A6NKQ9 MIR935-201ENST00000401179 91 ntBASIC15.74■□□□□ 0.11
CGB1A6NKQ9 AC026185.1-201ENST00000445748 174 ntBASIC15.74■□□□□ 0.11
CGB1A6NKQ9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 AC105036.2-201ENST00000569468 176 ntBASIC15.74■□□□□ 0.11
CGB1A6NKQ9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 AP001271.2-201ENST00000624018 1556 ntBASIC15.74■□□□□ 0.11
CGB1A6NKQ9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CGB1A6NKQ9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 PHGDH-210ENST00000641115 1638 ntBASIC15.73■□□□□ 0.11
CGB1A6NKQ9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 LSM12P1-201ENST00000411836 588 ntBASIC15.73■□□□□ 0.11
CGB1A6NKQ9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 AF201337.1-201ENST00000520239 748 ntBASIC15.73■□□□□ 0.11
CGB1A6NKQ9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms