Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 AC105020.6-201ENST00000621523 1217 ntBASIC19.69■□□□□ 0.74
CCDC189A1A4V9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.68■□□□□ 0.74
CCDC189A1A4V9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 AC069236.1-201ENST00000604339 616 ntBASIC19.68■□□□□ 0.74
CCDC189A1A4V9 AC231657.2-201ENST00000624556 255 ntBASIC19.68■□□□□ 0.74
CCDC189A1A4V9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 PTBP1P-201ENST00000554374 1601 ntBASIC19.68■□□□□ 0.74
CCDC189A1A4V9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC189A1A4V9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 KRT18P68-201ENST00000392293 1000 ntBASIC19.67■□□□□ 0.74
CCDC189A1A4V9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC189A1A4V9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 AL691432.2-201ENST00000607222 2038 ntBASIC19.66■□□□□ 0.74
CCDC189A1A4V9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 AC026271.2-201ENST00000428091 497 ntBASIC19.66■□□□□ 0.74
CCDC189A1A4V9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 KRT8P17-201ENST00000453110 1448 ntBASIC19.66■□□□□ 0.74
CCDC189A1A4V9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC189A1A4V9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 AL031963.3-201ENST00000606441 850 ntBASIC19.65■□□□□ 0.74
CCDC189A1A4V9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 AC011767.1-201ENST00000617410 1153 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms