Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 AC131212.1-201ENST00000613771 668 ntBASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 AC079598.2-202ENST00000546624 1451 ntBASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 AIRN-201ENST00000601203 4374 ntBASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 TERF1P2-201ENST00000583350 1212 ntBASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV27A0A0K0K1C4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 AC123595.1-201ENST00000440769 1046 ntBASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRBV27A0A0K0K1C4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms