Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 AP000974.1-201ENST00000623909 2387 ntBASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 LSM12P1-201ENST00000411836 588 ntBASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 AC023632.3-201ENST00000521633 145 ntBASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 AC080038.1-201ENST00000611274 1154 ntBASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 AC120498.9-201ENST00000339021 3867 ntBASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV27A0A087WT01 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 AC073111.5-205ENST00000641717 521 ntBASIC17.85■□□□□ 0.45
TRAV27A0A087WT01 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV27A0A087WT01 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
TRAV27A0A087WT01 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 AC133552.2-202ENST00000575694 574 ntBASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 AL050303.2-201ENST00000619798 666 ntBASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV27A0A087WT01 MKRN4P-201ENST00000444706 1521 ntBASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms