Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AL158068.1-201ENST00000506116 616 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 IGKV3D-25-201ENST00000519599 235 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC090888.3-201ENST00000558917 509 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC079315.1-201ENST00000602952 623 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AP001437.1-201ENST00000608783 456 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 uc_338.26-201ENST00000612659 160 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC138627.1-204ENST00000641894 765 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC008627.1-201ENST00000517511 1704 ntBASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4BQ9Y4P1 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 PSG10P-201ENST00000501199 1500 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 MIR130B-202ENST00000385018 82 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 RN7SKP240-201ENST00000410583 375 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 NMD3P2-201ENST00000421815 761 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 SDC4P-201ENST00000453285 601 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 ACA64.4-201ENST00000459070 127 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC135999.1-201ENST00000478962 479 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC083795.1-201ENST00000491760 320 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 RN7SKP248-201ENST00000516278 305 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 MIR4420-201ENST00000583944 77 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AP001542.1-201ENST00000591314 200 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AL713998.2-201ENST00000604538 1198 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC009237.12-201ENST00000604755 742 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC004801.6-201ENST00000616571 978 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 MIR6778-201ENST00000617912 73 ntBASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
ATG4BQ9Y4P1 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 COX6B1P3-201ENST00000312310 260 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms