Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RPS12P16-201ENST00000399739 407 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 CNN2P7-201ENST00000400583 932 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 MIR548K-201ENST00000408406 116 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RPL36P2-201ENST00000426026 315 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RPS23P8-201ENST00000429775 330 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RNU7-63P-201ENST00000459054 62 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 TMED10P2-201ENST00000474255 612 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC017015.1-201ENST00000477387 286 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RN7SL141P-201ENST00000484215 266 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC083904.1-201ENST00000487828 231 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RNU2-53P-201ENST00000516257 147 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RNU6-255P-201ENST00000516957 105 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC103855.4-201ENST00000533158 265 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AP002373.2-201ENST00000541631 1060 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC020612.1-201ENST00000547655 541 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC025260.1-201ENST00000548858 430 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 SRMP2-201ENST00000553832 916 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 SOD1P2-201ENST00000563903 451 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AL023284.4-201ENST00000564248 374 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RPL10P15-201ENST00000585756 315 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RPL26P30-202ENST00000602923 645 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC104687.2-201ENST00000604442 342 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC018889.1-201ENST00000605372 397 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC007485.1-201ENST00000616755 206 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 RPL23AP61-201ENST00000623642 466 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 MTCO1P25-201ENST00000414449 1799 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC007038.1-201ENST00000452057 2199 ntTSL 2 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 LEO1-202ENST00000315141 1981 ntTSL 2 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 VEZF1P1-201ENST00000423931 1541 ntBASIC8.39□□□□□ -1.07
LHX6Q9UPM6 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LHX6Q9UPM6 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 PEX5L-209ENST00000468741 2309 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 ANKRD20A21P-202ENST00000623715 3588 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 CYP2G1P-201ENST00000252909 2511 ntTSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AHCYP5-201ENST00000331585 1238 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 RNU6-1115P-201ENST00000362490 106 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 RN7SKP1-201ENST00000365525 307 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 RNU4-2-201ENST00000365668 141 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 RNU6-1109P-201ENST00000391187 107 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AL390316.1-201ENST00000406279 553 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 RNU2-9P-201ENST00000410194 145 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AL450992.3-201ENST00000413192 568 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 FUNDC2P4-201ENST00000441207 421 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 HMGB1P7-201ENST00000450921 612 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC104308.1-201ENST00000454621 333 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC097522.1-201ENST00000507811 1042 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 Y_RNA.682-201ENST00000516457 100 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC087854.1-201ENST00000519706 414 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 AC023310.2-201ENST00000553844 547 ntBASIC8.38□□□□□ -1.07
LHX6Q9UPM6 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
LHX6Q9UPM6 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms