Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AL139099.4-201ENST00000614802 114 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC009120.7-201ENST00000623452 780 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 CASC19-274ENST00000642018 970 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 TTC41P-205ENST00000551270 3963 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 QRSL1P1-201ENST00000400977 1540 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC016739.1-201ENST00000405359 345 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 GAPDHP75-201ENST00000433910 943 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 TUBB4BP6-201ENST00000437576 479 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 TIMM8BP2-201ENST00000445940 251 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC009963.3-201ENST00000458090 486 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC098847.1-201ENST00000473094 348 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AL158068.1-201ENST00000506116 616 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AP001357.1-201ENST00000586304 1053 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AL136131.3-201ENST00000607600 188 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC092266.1-201ENST00000610958 165 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AL136228.1-201ENST00000622221 319 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC000095.2-202ENST00000637415 154 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AL354854.1-201ENST00000455940 1363 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 AC063923.1-201ENST00000478982 1619 ntBASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS29Q9UBQ0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 FBXL21-201ENST00000297158 1305 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 RN7SKP78-201ENST00000364711 318 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 MIR130B-202ENST00000385018 82 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 PNKDP1-201ENST00000435914 430 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 RPL12P39-201ENST00000455456 496 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AC021006.1-201ENST00000489849 553 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 RN7SKP35-201ENST00000517210 151 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 RPA2P1-201ENST00000556557 721 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 MIR3154-201ENST00000577829 84 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AC090236.2-201ENST00000587933 1101 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AC245014.3-201ENST00000618589 347 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 AP004607.3-201ENST00000530354 3915 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 PARP4P2-201ENST00000446672 3326 ntBASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VPS29Q9UBQ0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS29Q9UBQ0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms