Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AC092724.1-201ENST00000624623 3397 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL031985.1-201ENST00000392713 418 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 RPL7P58-201ENST00000402913 758 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 CDY17P-201ENST00000414121 1282 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 HMGA1P8-201ENST00000414130 321 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 BX323845.3-201ENST00000428215 527 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL445928.1-201ENST00000435545 222 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL512637.1-201ENST00000439523 1231 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AP006222.1-205ENST00000450734 457 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 RPL7L1P3-201ENST00000455249 689 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AC002075.1-201ENST00000457396 676 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AC008629.2-201ENST00000503783 483 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL356801.1-201ENST00000559320 294 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 ZNF322P1-201ENST00000568013 1209 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AC027334.1-201ENST00000603257 310 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL512356.3-201ENST00000623005 461 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 AL355480.1-201ENST00000629041 99 ntBASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CLCF1Q9UBD9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RN7SKP77-201ENST00000363261 353 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RN7SKP128-201ENST00000364270 303 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RNA5SP500-201ENST00000364486 119 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AP003170.5-201ENST00000397185 335 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RN7SKP151-201ENST00000410230 316 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RPS7P3-201ENST00000443360 580 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 SETP20-201ENST00000457046 852 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RPL23AP40-201ENST00000487630 390 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RPL7P51-201ENST00000490532 749 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 TPM3P3-201ENST00000521343 354 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC079600.1-201ENST00000550326 297 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC103703.1-201ENST00000634783 663 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms